Task: Get OpenSNP data and process it into small files.
Data: openSNP data from the crowdAI challenge.
The main file is opensnp-data.Rmd
that will download the big openSNP file and chop it up into small pieces.
After knitting opensnp-data.Rmd
, the folder data/out/*
will contain three files that are ready to be copied and used:
genotyping_data_subset_train.bim
: genotype data descriptiongenotyping_data_subset_train.raw
: genotype datatraining_set_details.txt
: phenotype data