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..to facilitate comparisons between any utility function changes + prevent regression when developing.
would be good to set up some macro benchmarks too, e.g. using SRR606249.sig.gz in test-data as query...
The text was updated successfully, but these errors were encountered:
Note, can't use criterion with cdylib-only build. Recommendations online to add rlib, but that doesn't build on my system (arm mac)
cdylib
rlib
ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation)
could probably get around this - not sure if worthwhile
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see also: #214 (comment) which says -
scripts in /home/ctbrown/scratch3/SRR606249-feb13-2024
github repo for scripts: https://github.com/sourmash-bio/2024-benchmark-branchwater-plugin
srun command I used:
srun -p bmh --time=24:00:00 --nodes=1 --cpus-per-task=64 --mem=50GB --pty /bin/bash
I feel like we could probably do them manually before each release easily enough. The 45 minute one (sourmash gather) should not be automated :)
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..to facilitate comparisons between any utility function changes + prevent regression when developing.
would be good to set up some macro benchmarks too, e.g. using SRR606249.sig.gz in test-data as query...
The text was updated successfully, but these errors were encountered: