decompress a subset of entries

[kad-ecoli]

Is it possible to extract the pdb files for a subset of entries from a folcomp database. I am looking for something like this:

foldcomp decompress --subset id_list.txt afdb_uniprot_v4 

where id_list.txt list a subset of entries in afdb_uniprot_v4, one entry per line.

[martin-steinegger]

yes I totally agree that this would be great. @khb7840 yes we want this! Didn't we built something similar?

[khb7840]

Current file list input works for multiple files, not for ids. Thank you for the suggestion. We'll work on implementing that feature.

[kad-ecoli]

I see that README.md suggest using mmseqs to subset database. Unfortunately, that does not work, as reported by issue
#28

[khb7840]

This feature is now available in the latest version as:

foldcomp decompress --id-list id_list.txt afdb_uniprot_v4