build plugin in docker

.gitignore

@@ -0,0 +1 @@
+bld

script/build_plug_linux.sh

@@ -0,0 +1,4 @@
+#!/bin/bash
+
+SCRIPTPATH=`dirname $(dirname $(realpath $0))`
+docker run -v "$SCRIPTPATH:/Trelis-plugin" -v "$2:/Trelis-sdk" -it $1 bash -c "/Trelis-plugin/script/build_plugin.sh $3; bash"

script/build_plugin.sh

@@ -0,0 +1,26 @@
+#!/bin/bash
+CURRENT=$(pwd)
+SCRIPTPATH=`dirname $(dirname $(realpath $0))`
+
+PLUGIN_DIR="plugin-build"
+PLUGIN_ABS_PATH=""
+
+source ${SCRIPTPATH}/script/linux_share_build.sh
+
+install_prerequisites
+
+setup_folder
+
+build_moab
+build_dagmc
+
+setup_Trelis_sdk $1
+build_plugin $1
+build_plugin_pkg $1
+
+
+
+mv -v svalinn-plugin_linux_$1.tgz /Trelis-sdk
+cd ..
+rm -rf pack bld DAGMC lib moab
+rm Trelis-plugin

script/linux_share_build.sh

@@ -0,0 +1,119 @@
+#!/bin/bash
+
+
+
+function install_prerequisites() {
+    TZ=America/Chicago
+    ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone
+    apt-get update -y
+    apt-get install -y g++ libeigen3-dev libhdf5-dev patchelf git cmake
+}
+
+function setup_folder() {
+    cd ${CURRENT}
+    mkdir ${PLUGIN_DIR}
+    echo "Building the Trelis plugin in ${CURRENT}\\${PLUGIN_DIR}"
+
+    unset LD_LIBRARY_PATH
+
+    cd ${PLUGIN_DIR}
+    PLUGIN_ABS_PATH=$(pwd)
+    ln -s $SCRIPTPATH/ ./
+}
+
+function build_moab() {
+    cd ${PLUGIN_ABS_PATH}
+    mkdir -pv moab/bld
+    cd moab
+    git clone https://bitbucket.org/fathomteam/moab -b Version5.1.0
+    cd bld
+    cmake ../moab -DENABLE_HDF5=ON \
+            -DCMAKE_PREFIX_PATH=/usr/lib/x86_64-linux-gnu/hdf5/serial \
+            -DBUILD_SHARED_LIBS=ON \
+            -DENABLE_BLASLAPACK=OFF \
+            -DENABLE_FORTRAN=OFF \
+            -DCMAKE_CXX_FLAGS=-D_GLIBCXX_USE_CXX11_ABI=0 \
+            -DCMAKE_INSTALL_PREFIX=${PLUGIN_ABS_PATH}/moab
+
+    make -j`grep -c processor /proc/cpuinfo`
+    make install
+    cd ../..
+    rm -rf moab/moab moab/bld
+}
+
+
+function build_dagmc(){
+    cd ${PLUGIN_ABS_PATH}
+    mkdir -pv DAGMC/bld
+    cd DAGMC
+    git clone https://github.com/bam241/DAGMC -b build_exe
+    cd bld
+    cmake ../DAGMC -DCMAKE_CXX_FLAGS=-D_GLIBCXX_USE_CXX11_ABI=0 \
+                -DMOAB_DIR=${PLUGIN_ABS_PATH}/moab \
+                -DBUILD_UWUW=ON \
+                -DBUILD_TALLY=OFF \
+                -DBUILD_BUILD_OBB=OFF \
+                -DBUILD_MAKE_WATERTIGHT=ON \
+                -DBUILD_SHARED_LIBS=ON \
+                -DBUILD_STATIC_LIBS=OFF \
+                -DBUILD_EXE=OFF \
+                -DCMAKE_POSITION_INDEPENDENT_CODE=ON \
+                -DCMAKE_BUILD_TYPE=Release \
+                -DCMAKE_INSTALL_PREFIX=${PLUGIN_ABS_PATH}/DAGMC
+    make -j`grep -c processor /proc/cpuinfo`
+    make install
+    cd ../..
+    rm -rf DAGMC/DAGMC DAGCM/bld
+}
+
+function setup_Trelis_sdk() {
+    cd /Trelis-sdk 
+    dpkg -i Trelis-$1-Lin64.deb
+
+    cd /opt
+    tar -xzvf /Trelis-sdk/Trelis-SDK-$1-Lin64.tar.gz
+}
+
+function build_plugin(){
+    cd ${PLUGIN_ABS_PATH}
+    cd Trelis-plugin
+    git submodule update --init
+    cd ../
+    mkdir -pv bld
+    cd bld
+    cmake ../Trelis-plugin -DCUBIT_ROOT=/opt/Trelis-${1::4} \
+                           -DDAGMC_DIR=${PLUGIN_ABS_PATH}/DAGMC \
+                           -DCMAKE_BUILD_TYPE=Release \
+                           -DCMAKE_INSTALL_PREFIX=${PLUGIN_ABS_PATH}
+    make -j`grep -c processor /proc/cpuinfo`
+    make install
+}
+
+function build_plugin_pkg(){
+    cd ${PLUGIN_ABS_PATH}
+    mkdir -p pack/bin/plugins/svalinn
+    cd pack/bin/plugins/svalinn
+
+    # Copy all needed libraries into current directory
+    cp -pPv ${PLUGIN_ABS_PATH}/lib/* .
+    cp -pPv ${PLUGIN_ABS_PATH}/moab/lib/libMOAB.so* .
+    cp -pPv ${PLUGIN_ABS_PATH}/DAGMC/lib/libdagmc.so* .
+    cp -pPv ${PLUGIN_ABS_PATH}/DAGMC/lib/libmakeWatertight.so* .
+    cp -pPv ${PLUGIN_ABS_PATH}/DAGMC/lib/libpyne_dagmc.so* .
+    cp -pPv ${PLUGIN_ABS_PATH}/DAGMC/lib/libuwuw.so* .
+    cp -pPv /usr/lib/x86_64-linux-gnu/libhdf5_serial.so* .
+    chmod 644 *
+
+    # Set the RPATH to be the current directory for the DAGMC libraries
+    patchelf --set-rpath /opt/Trelis-${1::4}/bin/plugins/svalinn libMOAB.so
+    patchelf --set-rpath /opt/Trelis-${1::4}/bin/plugins/svalinn libdagmc.so
+    patchelf --set-rpath /opt/Trelis-${1::4}/bin/plugins/svalinn libmakeWatertight.so
+    patchelf --set-rpath /opt/Trelis-${1::4}/bin/plugins/svalinn libpyne_dagmc.so
+    patchelf --set-rpath /opt/Trelis-${1::4}/bin/plugins/svalinn libuwuw.so
+
+    # Create the Svalinn plugin tarball
+    cd ..
+    ln -sv svalinn/libsvalinn_plugin.so .
+    cd ../..
+    tar --sort=name -czvf svalinn-plugin_linux_$1.tgz bin
+}