theBroeckelLab
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bulkRNA_processing-RNAseq
bulkRNA_processing-RNAseq PublicAnalysis pipeline for quality control, alignment, and quantification of raw data from bulk RNAseq experiments
Shell
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bulkRNA_processing-AmpliSeq
bulkRNA_processing-AmpliSeq PublicAnalysis pipeline for quality control, alignment, and quantification of raw data from targeted AmpliSeq platform
R
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wgs_variantCalling
wgs_variantCalling PublicSNV and SV calling pipeline for whole genome sequencing data
R
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ogm_validation
ogm_validation PublicRepository for scripts related to OGM/Bionano processing, validation, and interpretation
R 1
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nanopore_analysis
nanopore_analysis PublicRepository for scripts related to processing of long-read nanopore data, quality control, genome assembly, and variant calling
R
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RNAseq_analysis
RNAseq_analysis PublicAnalysis of expression data from RNAseq and AmpliSeq technologies
R
Repositories
- nanopore_analysis Public
Repository for scripts related to processing of long-read nanopore data, quality control, genome assembly, and variant calling
theBroeckelLab/nanopore_analysis’s past year of commit activity - bulkRNA_processing-AmpliSeq Public
Analysis pipeline for quality control, alignment, and quantification of raw data from targeted AmpliSeq platform
theBroeckelLab/bulkRNA_processing-AmpliSeq’s past year of commit activity - ogm_validation Public
Repository for scripts related to OGM/Bionano processing, validation, and interpretation
theBroeckelLab/ogm_validation’s past year of commit activity - bulkRNA_processing-RNAseq Public
Analysis pipeline for quality control, alignment, and quantification of raw data from bulk RNAseq experiments
theBroeckelLab/bulkRNA_processing-RNAseq’s past year of commit activity