Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

update docs and python versions #154

Merged
merged 59 commits into from
Jun 27, 2023
Merged

update docs and python versions #154

merged 59 commits into from
Jun 27, 2023

Conversation

AnnaChristina
Copy link
Member

No description provided.

dependabot bot and others added 30 commits August 23, 2022 05:23
Bumps [pep8-naming](https://github.com/PyCQA/pep8-naming) from 0.11.1 to 0.13.2.
- [Release notes](https://github.com/PyCQA/pep8-naming/releases)
- [Changelog](https://github.com/PyCQA/pep8-naming/blob/main/CHANGELOG.rst)
- [Commits](PyCQA/pep8-naming@0.11.1...0.13.2)

---
updated-dependencies:
- dependency-name: pep8-naming
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
* wald test implementation still ongoing
* the tested parameter (log fold change / fold change) table is always (genes, type pairs) in varm
* tested parameters are set to nan if multi coefficient tests are used to indicate that no trivial summary of multiple coefficients to a fold change is possible. if condition test with a single condition is used, this single coefficient is reported.
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 2.1.4 to 4.3.0.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](actions/setup-python@v2.1.4...v4.3.0)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [pre-commit-hooks](https://github.com/pre-commit/pre-commit-hooks) from 3.4.0 to 4.4.0.
- [Release notes](https://github.com/pre-commit/pre-commit-hooks/releases)
- [Changelog](https://github.com/pre-commit/pre-commit-hooks/blob/main/CHANGELOG.md)
- [Commits](pre-commit/pre-commit-hooks@v3.4.0...v4.4.0)

---
updated-dependencies:
- dependency-name: pre-commit-hooks
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
AnnaChristina and others added 28 commits April 17, 2023 17:02
…-naming-0.13.2

[DEPENDABOT]: Bump pep8-naming from 0.11.1 to 0.13.2
…opment/actions/setup-python-4.3.0

[DEPENDABOT]: Bump actions/setup-python from 2.1.4 to 4.3.0
…commit-hooks-4.4.0

[DEPENDABOT]: Bump pre-commit-hooks from 3.4.0 to 4.4.0
@github-actions
Copy link

Hi @AnnaChristina,

It looks like this pull-request is has been made against the theislab/ncem master or main branch.
The master/main branch should always contain code from the latest release.
Because of this, PRs to master/main are only allowed if they come from any theislab/ncem release or patch branch.

You do not need to close this PR, you can change the target branch to development by clicking the "Edit" button at the top of this page.

Thanks again for your contribution!

@AnnaChristina AnnaChristina merged commit 216fd57 into main Jun 27, 2023
20 of 46 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants