fix download link

theislab · Nov 7, 2023 · f7dfd20 · f7dfd20
1 parent af6e838
commit f7dfd20
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/...rs/loaders/d10_1101_753806/homosapiens_lungparenchyma_2020_10xsequencing_habermann_001.py b/...rs/loaders/d10_1101_753806/homosapiens_lungparenchyma_2020_10xsequencing_habermann_001.py
@@ -9,7 +9,7 @@ def load(data_dir, **kwargs):
         os.path.join(data_dir, "GSE135893_genes.tsv.gz"),
         os.path.join(data_dir, "GSE135893_barcodes.tsv.gz"),
         os.path.join(data_dir, "GSE135893_IPF_metadata.csv.gz"),
-        os.path.join(data_dir, "aba1972_Table_S2.csv"),
+        os.path.join(data_dir, "aba1972_table_s2.csv"),
     ]
     adata = anndata.read_mtx(fn[0]).T
     adata.var = pd.read_csv(fn[1], index_col=0, header=None, names=["ids"])

diff --git a/.../loaders/d10_1101_753806/homosapiens_lungparenchyma_2020_10xsequencing_habermann_001.yaml b/.../loaders/d10_1101_753806/homosapiens_lungparenchyma_2020_10xsequencing_habermann_001.yaml
@@ -12,7 +12,7 @@ dataset_wise:
         - "https://ftp.ncbi.nlm.nih.gov/geo/series/GSE135nnn/GSE135893/suppl/GSE135893%5Fbarcodes%2Etsv%2Egz"
     download_url_meta:
         - "https://ftp.ncbi.nlm.nih.gov/geo/series/GSE135nnn/GSE135893/suppl/GSE135893%5FIPF%5Fmetadata%2Ecsv%2Egz"
-        - "https://www.science.org/doi/suppl/10.1126/sciadv.aba1972/suppl_file/aba1972_table_s2.csv"
+        - "manual,aba1972_table_s2.csv,https://www.science.org/doi/suppl/10.1126/sciadv.aba1972/suppl_file/aba1972_table_s2.csv"
     primary_data: True
     year: 2020
 layers: