added optional custom cell ontology to estimator constructor #254
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Reference topologie dictionaries: https://github.com/theislab/sfaira/blob/dev/sfaira/versions/topologies/mouse/celltype/celltypemlp.py |
davidsebfischer
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May 28, 2021
* fixes training-related bugs * added zarr-dask distributed acccess store store * fixed indexing bug in h5ad store * fixed store unit test and renamed unknown meta data field in sfaira streamlining * added optional custom cell ontology to estimator constructor (#254) * fix handling of new model_id format * clean up model zoo * fixed grid search summaries * fix celltype handling in UI * include topology files in zenodo deposition Co-authored-by: le-ander <20015434+le-ander@users.noreply.github.com>
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