Code

Cellxgene export#315

Code

Merged

davidsebfischer merged 22 commits intodevtheislab/sfaira:devfrom cellxgene_exporttheislab/sfaira:cellxgene_exportCopy head branch name to clipboardJun 15, 2021

+262-168

Commits

Commits on Jun 9, 2021

• updated rounding warning

  davidsebfischer

  committed
  10172db

• updated streamline script

  davidsebfischer

  committed
  16f73f6

• improved cellxgene export

  davidsebfischer

  committed
  6046f14

• updated DOIs to distinguish preprint and journal

  davidsebfischer

  committed
  b8d8b15

• fixed issue with ethnicity handling in cellxgene export

  davidsebfischer

  committed
  c7a2c99

• fixed field names

  davidsebfischer

  committed
  bf828b6

• removed unnecessary calls to meta

  davidsebfischer

  committed
  c02d68f

• added doi group attribute

  davidsebfischer

  committed
  635b8bf

• fixed loader

  davidsebfischer

  committed
  419d5ad

• fixed attribute lisfixed attribute listt

  davidsebfischer

  committed
  a0d4203

• fixed streamline

  davidsebfischer

  committed
  20d5874

• fixed streamlining

  davidsebfischer

  committed
  56c2e39

• allowed no meta path

  davidsebfischer

  committed
  9b5d514

• simplified streamlining

  davidsebfischer

  committed
  b5981f2

• fixed unknown handling

  davidsebfischer

  committed
  f5f3177

• fixed bug

  davidsebfischer

  committed
  a545726

• fixed cell type setting

  davidsebfischer

  committed
  db9bd73

• added ensemble gene names into object

  davidsebfischer

  committed
  e0b1b51

Commits on Jun 10, 2021

• reordered obs in cellxgene streamlining

  davidsebfischer

  committed
  f38f006

Commits on Jun 11, 2021

• fixed unknown cell table in cellxgene export

  davidsebfischer

  committed
  981fdae

Commits on Jun 13, 2021

• updated ontology for DOI

  davidsebfischer

  committed
  eec20ab

Commits on Jun 15, 2021

• fixed style

  davidsebfischer

  committed
  a4deda3