Update readme to refer to spapros smk repo #25
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| name: Run Example | |
| on: [push, pull_request] | |
| jobs: | |
| run-example: | |
| name: Run Example | |
| runs-on: "ubuntu-latest" | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| python-version: 3.9 | |
| mamba-version: "*" | |
| channels: defaults,conda-forge,bioconda | |
| channel-priority: true | |
| - name: Install Nextflow | |
| run: mamba install -c bioconda nextflow | |
| - name: Verify Nextflow Installation | |
| run: nextflow -version | |
| - name: Run Example | |
| run: | | |
| chmod +x run.sh | |
| ./run.sh |