Local version of the virus identification and analysis web server (tool set)
TrIdent- Transduction Identification: Automatic detection, classification and characterization of active transduction events in microbiomes.
Cocktail is a program for mathematical modelling of bacteriophage (phage) infection kinetics. Cocktail is a Windows 64-bit program and the source code can be developed in the directions that users see fit. This will be updated soon with a link to the scientific publication describing the program.
Detect elevations and gaps in read coverage on metagenome contigs or assembled genomes
Langevin dynamics simulation of bacteriophage-bacteria interaction
📑Reports and bioinformatics analyses from internship in Indonesia
Prediction of bacterial host for phage
Scripts used to prepare the "Self-splicing introns in genes of Bastillevirinae bacteriophages" paper
Creation of a local database for bacteriophages
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