LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.

🧬High-performance genetics- and genomics-related data visualization using Makie.jl

Colocalization analysis of genetic association signals

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

An R package for conducting co-localization analysis. Edit

Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).

echoverse module: Locus plot creation for fine-mapping and colocalization studies.

An automated tool for Object-based colocalization in fluorescence microscopy images.

An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.

Preprocess, noise-reduction, threshold & quantify images to get box plots for each class (mainly cell cultures of different cel llines). Colocalization due to a naive trick of counting all overlapping signals/pixels. Could be done in ImageJ as well, but i thought this is better suited than fiddling with macros.

Analyses for the publication titled "Integrating disease and drug-related phenotypes for improved identification of pharmacogenomic variants"

This is a fork from qqman package

Bioinformatic software to identify causal variants in GWAS and GWAS/eQTL studies.

Image processing desktop GUI tool to automate colocalization analysis across multiple channels on a fluorescence image

ImageJ scripts for analyzing nuclei intensity and overlap in brain sections

Colocalization metrics and distances for images or their sparse representations.

Code for the PeerJ paper (colocr: an R package for conducting co-localization analysis on fluorescence microscopy images)

Methylation and mqtl analysis of the developing knee

A shiny app for conducting co-localization analysis.