Segment Anything for Microscopy
Image segmentation - general superpixel segmentation & center detection & region growing
nucleus/cell and histopathology image classification,detection,segmentation
Our solution for ICIAR 2018 Grand Challenge
Read and write Neuroglancer datasets programmatically.
Visualize, share and annotate your large 3D images online
A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
Creating figures and animations for multi-channel images with a focus on microscopy.
Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.
Generative Adversarial Network for single image super-resolution in high content screening microscopy images
Utils and convenience functions for large-scale bio-image analysis.
Particle tracking by solving linear assignment problem.
Pure Python library for reading NIS Elements ND2 images and metadata
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
Distributed segmentation for bio-image-analysis
Label Free Prediction of Cell Painting from Brightfield Images
PiSCAT is a python-based package with a graphical user interface for performing high-performance analysis on a variety of iSCAT measurements.
Global Voxel Transformer Networks (GVTNets)
img2vid
A Python library for easily calculating image-quality related features from images
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