Parse Illumina sample sheets with Python

Single cell Nanopore sequencing data for Genotype and Phenotype

An unofficial demultiplexing strategy for SPLiT-seq RNA-Seq data

Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing

Demultiplexing and debarcoding tool designed for LR-Split-seq data.

🍸 Web-based database system for flow cell management (incl. REST API)

Simple management of Illumina sequencing flowcells

snakemake workflow for basecalling and demultiplexing of ONT sequencing data

Demultiplexing utility, companion to flowcelltool.

Base-call error-filtering and read preprocessing pipeline for fastq libraries

⏩ Streamed and parallel demultiplexing of fastq files in python

🍝 Digestiflow Demultiplexing Tool

Anglerfish - Nanopore reads from Illumina libraries

Scripts for routine analysis of clinical next generation sequencing (NGS) data at Synnovis Genetics

DEmultiplexing MOnitoring Report Tool. DEMORT evaluates demultiplexed fastq files by computing various metrics.

fdemux is a FASTA/FASTQ demultiplexer with support for (arbitrarily) fuzzy barcode matching, asymmetric barcoding, and parallel processing.

A repository for generating de-multiplexing report for Illumina sequencing runs using Pyspark

Fast demultiplexing of Illumina FASTQ files using Python.

Tool for demultiplexing Illumina FASTQ reads when no index reads are available. Intended usage is a a recovery tool.

custom python script to demultiplex sequencing reads