Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler
-
Updated
Jul 1, 2024 - Shell
#
nanopore
Here are 11 public repositories matching this topic...
NanoASV official repo
docker open-source workflow bioinformatics snakemake nanopore end-to-end conda singularity bioinformatics-pipeline metabarcoding conda-environment asv amplicon-sequencing nanopore-sequencing snakemake-workflow nanopore-analysis-pipeline nanopore-reads nanopore-minion metabarcoding-pipeline
-
Updated
Jan 28, 2025 - Shell
a sequence analysis workflow for low-input nanopore sequencing
-
Updated
Dec 25, 2022 - Shell
NGS4ECOPROD - An easy-to-use conda environment and pipelines for metagenome sequence analysis
-
Updated
Jul 9, 2024 - Shell
Scripts for analysing MD simulations of nanopores and DNA translocation (ionic current, translocation rate, pore hydrophobicity).
-
Updated
Sep 26, 2023 - Shell
A generic best practice workflow for processing human Oxford Nanopore Technologies (ONT) sequencing data.
-
Updated
Mar 6, 2023 - Shell
Bioinformatic pipeline for SARS-CoV-2 sequence analysis
-
Updated
Nov 3, 2021 - Shell
Assembly of chloroplast genome using long-reads and short-reads for Genomics Course 2021 (MSc Bioinformatics for Computational Genomics)
-
Updated
Apr 2, 2022 - Shell
-
Updated
Jul 29, 2021 - Shell
Scripts and data regarding Vampyrellida genomics.
-
Updated
Jul 29, 2024 - Shell
Improve this page
Add a description, image, and links to the nanopore topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the nanopore topic, visit your repo's landing page and select "manage topics."