SORTED: A curated collection of interesting ideas, tools, and resources in neuroscience, data management, and data science, all in the spirit of Open Science. Additionally, it includes interesting miscellaneous links related to AI, biohacking, and productivity.

My "Farm of Ideas" is supposed to store ideas I would like to develop into scientific progress some day. This is the template for all ideas in this Farm.

Create an open database for the thermodynamics of enzyme-catalyzed reactions (and other metabolism relevant thermodynamic data)

This is my project repository, here I will upload all my projects related to Robotics, Electronics, Science, and Software.

compare two-point UV/Vis spectroscopy read-out with spectral unmixing

Thermodynamics can present itself as kinetic inhibition

Try to observe with a microscope what is making an UV/Vis spectroscopy method fail

Measuring the invisible: exploiting a two-substrate two-product equilibrium to determine the decomposition rate of one of the products

When is it favorable to do two-step or one-pot coupled enzyme reactions?

Compare the results from eQuilibrator (component contribution) or group contribution methods with experimental results from nucleoside phosphorolysis

When determining equilibrium constants of multi-substrate / multi-product reactions, their ratios affect the uncertainty of the result.

Determine the thermodynamic properties for nucleotide conversions

Generalized yields of coupled enzymatic reactions.

Isolate the degradation product of fluoro-nucleosides

Finding thermodynamic cycles in the metabolism

It is possible to predict the spectrum of e.g. a nucleobase in a nucleoside-nucleobase conversion.