A dependency-free cross-platform swiss army knife for PDB files.
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functions that make work in PyMOL more productive..
Calculation of interatomic interactions in molecular structures
Python package to manage protein structures and their annotations
Benchmarking common tasks on proteins in various languages and packages
PACKMAN: PACKing and Motion ANalysis
Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.
A fragment-based molecular assembly toolkit
Script to facilitate the making of horizontal scripts
Protein-Protein Docking using Genetic Algorithm
A Python framework for structural bioinformatics.
Clusters protein chains based on CA distance difference
A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions
PointNet for Deep Rank: protein-protein interaction scoring using neural networks
Partner specific prediction of protein binding sites
Python implementation of 3D Zernike moments with NumPy
The code from the paper "An automated protocol for modelling peptide substrates to proteases"
Visualizing the effect of SNPs on protein structure using iCn3D
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