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Updated LabMetadata model enum for assay, type, source - migration script #698

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Jun 29, 2024
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Updated LabMetadata model enum for assay, type, source - migration script #698

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132 changes: 132 additions & 0 deletions data_portal/migrations/0010_alter_labmetadata_assay_alter_labmetadata_quality_and_more.py
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# Generated by Django 4.2.11 on 2024-06-29 01:20

from django.db import migrations, models


class Migration(migrations.Migration):

dependencies = [
("data_portal", "0009_alter_workflow_version_alter_workflow_wfl_id_and_more"),
]

operations = [
migrations.AlterField(
model_name="labmetadata",
name="assay",
field=models.CharField(
choices=[
("TsqNano", "Tsq Nano"),
("TsqSTR", "Tsq Str"),
("NebDNA", "Neb Dna"),
("NebRNA", "Neb Rna"),
("10X-3prime-expression", "Ten X 3Prime"),
("10X-5prime-expression", "Ten X 5Prime"),
("10X-ADT", "Ten X Adt"),
("10X-ATAC", "Ten X Atac"),
("10X-CITE-feature", "Ten X Cite Feat"),
("10X-CITE-hashing", "Ten X Cite Hash"),
("10X-CNV", "Ten X Cnv"),
("10X-CSP", "Ten X Csp"),
("10X-GEX", "Ten X Gex"),
("10X-VDJ", "Ten X Vdj"),
("10X-VDJ-BCR", "Ten X Vdj Bcr"),
("10X-VDJ-TCR", "Ten X Vdj Tcr"),
("AgSsCRE", "Ag Ss Cre"),
("bATAC", "B Atac"),
("CRISPR", "Crispr"),
("ctTSO", "Ct Tso"),
("IDTxGen", "Idt X Gen"),
("IlmnDNAprep", "Ilmn Dna Prep"),
("NebDNAu", "Neb Dna U"),
("NebMS", "Neb Ms"),
("PCR-Free-Tagmentation", "Pcr Free"),
("Takara", "Takara"),
("TPlxHV", "Tpl X Hv"),
("TSODNA", "Tso Dna"),
("BM-5L", "Bm 5L"),
("BM-6L", "Bm 6L"),
("MeDIP", "Me Dip"),
("ctTSOv2", "Ct Tso V2"),
],
max_length=255,
),
),
migrations.AlterField(
model_name="labmetadata",
name="quality",
field=models.CharField(
choices=[
("ascites", "Acites"),
("blood", "Blood"),
("bone-marrow", "Bone"),
("buccal", "Buccal"),
("cell-line", "Cell Line"),
("cfDNA", "Cf Dna"),
("cyst-fluid", "Cyst"),
("DNA", "Dna"),
("eyebrow-hair", "Eyebrow"),
("FFPE", "Ffpe"),
("FNA", "Fna"),
("OCT", "Oct"),
("organoid", "Organoid"),
("PDX-tissue", "Pdx"),
("plasma-serum", "Plasma"),
("RNA", "Rna"),
("tissue", "Tissue"),
("water", "Water"),
("skin", "Skin"),
],
max_length=255,
),
),
migrations.AlterField(
model_name="labmetadata",
name="source",
field=models.CharField(
choices=[
("ascites", "Acites"),
("blood", "Blood"),
("bone-marrow", "Bone"),
("buccal", "Buccal"),
("cell-line", "Cell Line"),
("cfDNA", "Cf Dna"),
("cyst-fluid", "Cyst"),
("DNA", "Dna"),
("eyebrow-hair", "Eyebrow"),
("FFPE", "Ffpe"),
("FNA", "Fna"),
("OCT", "Oct"),
("organoid", "Organoid"),
("PDX-tissue", "Pdx"),
("plasma-serum", "Plasma"),
("RNA", "Rna"),
("tissue", "Tissue"),
("water", "Water"),
("skin", "Skin"),
],
max_length=255,
),
),
migrations.AlterField(
model_name="labmetadata",
name="type",
field=models.CharField(
choices=[
("ctDNA", "Ct Dna"),
("ctTSO", "Ct Tso"),
("exome", "Exome"),
("other", "Other"),
("10X", "Ten X"),
("TSO-DNA", "Tso Dna"),
("TSO-RNA", "Tso Rna"),
("WGS", "Wgs"),
("WTS", "Wts"),
("BiModal", "Bi Modal"),
("MeDIP", "Me Dip"),
("Metagenm", "Metagenm"),
("MethylSeq", "Methyl Seq"),
],
max_length=255,
),
),
]