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Fix/workflowrun state handling #521

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merged 4 commits into from
Aug 28, 2024
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reisingerf
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FYI: @alexiswl

This should fix the WRSC handling of linked libraries, etc....

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@victorskl victorskl left a comment

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Nice refactor.!

@reisingerf reisingerf merged commit 59931d5 into main Aug 28, 2024
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@reisingerf reisingerf deleted the fix/workflowrun-state-handling branch August 28, 2024 06:08
@alexiswl
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Ah I should move all of my statuses to uppercases then

@alexiswl
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Should non-wrsc statuses also change to upper case?

i.e should SubjectInSamplesheet become SUBJECT_IN_SAMPLESHEET?

@reisingerf
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I think it would be good to follow some sort of convention, yes.

For now the workflow manager changes everything to upper case and replace "-" to "_".

But in your case, these are not WRSC statuses, but events internal to the stacky logic, no?

@alexiswl
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But in your case, these are not WRSC statuses, but events internal to the stacky logic, no?

Yes these are internal events not going through the workflow manager

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Add capability for workflow manager to link workflows to libraries
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