Inclusion of IROLL, IPCA, NEGFD routines and new features to NEGFC routines #348
Workflow file for this run
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# This workflow will install Python depe:ndencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: ci | |
on: [push, pull_request] | |
jobs: | |
no_object_checks: | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.8", "3.9", "3.10", "3.11"] | |
group: [1, 2, 3] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install pre-commit pytest pytest-cov sphinx | |
if [ -f requirements.txt ]; then pip install -r requirements-dev.txt; fi | |
# Uncomment below when ready to deal with a lot of PEP8 formatting changes | |
# - name: Verify files with pre-commit | |
# run: | | |
# # Setup pre-commit hooks | |
# pre-commit clean | |
# pre-commit install --hook-type pre-merge-commit | |
# pre-commit install --hook-type pre-push | |
# pre-commit install --hook-type post-rewrite | |
# pre-commit install-hooks | |
# pre-commit install | |
# # Run pre-commit hooks | |
# pre-commit run --files vip_hci/config/*.py | |
# pre-commit run --files vip_hci/fits/*.py | |
# pre-commit run --files vip_hci/fm/*.py | |
# pre-commit run --files vip_hci/greedy/*.py | |
# pre-commit run --files vip_hci/invprob/*.py | |
# pre-commit run --files vip_hci/metrics/*.py | |
# pre-commit run --files vip_hci/preproc/*.py | |
# pre-commit run --files vip_hci/psfsub/*.py | |
# pre-commit run --files vip_hci/stats/*.py | |
# pre-commit run --files vip_hci/var/*.py | |
- name: Test with pytest | |
run: | | |
pytest tests/pre_3_10 --cov=vip_hci/ --cov-report=xml --splits 3 --group ${{ matrix.group }} | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 | |
objects_check: | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.10", "3.11"] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install pre-commit pytest pytest-cov sphinx | |
if [ -f requirements.txt ]; then pip install -r requirements-dev.txt; fi | |
- name: Verify files with pre-commit | |
run: | | |
# Setup pre-commit hooks | |
pre-commit clean | |
pre-commit install --hook-type pre-merge-commit | |
pre-commit install --hook-type pre-push | |
pre-commit install --hook-type post-rewrite | |
pre-commit install-hooks | |
pre-commit install | |
# Run pre-commit hooks | |
pre-commit run --files vip_hci/objects/*.py | |
- name: Test with pytest | |
run: | | |
pytest tests/post_3_10 --cov=vip_hci/objects/ --cov-report=xml | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 |