SPMLMI: Predicting lncRNA–miRNA interactions in humans using a structural perturbation method
If you use this tool, please consider citing the following publication: https://doi.org/10.7717/peerj.11426
- ML_matrix: Known interaction pairs between miRNAs and lncRNAs.
- LS: The lncRNA similarity matrix.
- MS: The miRNA similarity matrix.
- main_SPMLMI: The main program of SPLMI.
- perturbation: The function for computing link predictability of complex networks.
- Make data preparations. Specify a complete file path and file name.
- Run "main_SPMLMI.m" for predicting lncRNA–miRNA interactions.
- lncRNA_id: The ids and names for lncRNAs.
- miRNA_id: The ids and names for miRNAs.
- Supplementary_Table_S1: Prediction results of the top 120 MALAT1-related miRNAs, and ranked by their prediction scores.