Add samtools for file format testing. #5049
cmnbroadgatk-tests.yml
on: pull_request
check if the environment has privileges
0s
build and push gatk docker to artifacts
11m 56s
Validate script WDLs using womtools
44s
Validate generated WDLs using womtools
13m 54s
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
Annotations
9 errors
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Java 17.0.6+10 build and test cloud
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Java 17.0.6+10 build and test unit
Process completed with exit code 1.
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Java 17.0.6+10 build and test unit
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions:
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Java 17.0.6+10 test on docker unit
Process completed with exit code 1.
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Java 17.0.6+10 test on docker unit
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions:
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Java 17.0.6+10 build and test integration
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions:
https://github.com/google-github-actions/auth
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Java 17.0.6+10 test on docker conda
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions:
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Java 17.0.6+10 test on docker variantcalling
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions:
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Java 17.0.6+10 test on docker integration
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions:
https://github.com/google-github-actions/auth
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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gatkDockerImage
|
2.2 GB |
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test-results-17.0.6+10-cloud
|
82 KB |
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test-results-17.0.6+10-integration
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575 KB |
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test-results-17.0.6+10-unit
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5.06 MB |
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test-results-docker-17.0.6+10-conda
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53.1 KB |
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test-results-docker-17.0.6+10-integration
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577 KB |
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test-results-docker-17.0.6+10-unit
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4.92 MB |
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test-results-docker-17.0.6+10-variantcalling
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31.9 KB |
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