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BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring. Build and Test GATK 4 #5054: Pull request #9020 synchronize by takutosato
February 11, 2025 17:59 44m 44s ts_bqsr_read_group
ts_bqsr_read_group
February 11, 2025 17:59 44m 44s
PR #9020 CodeQL #920: by takutosato
February 11, 2025 17:59 10m 52s refs/pull/9020/head
refs/pull/9020/head
February 11, 2025 17:59 10m 52s
BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring. Build and Test GATK 4 #5053: Pull request #9020 synchronize by takutosato
February 11, 2025 17:34 45m 38s ts_bqsr_read_group
ts_bqsr_read_group
February 11, 2025 17:34 45m 38s
PR #9020 CodeQL #919: by takutosato
February 11, 2025 17:34 10m 46s refs/pull/9020/head
refs/pull/9020/head
February 11, 2025 17:34 10m 46s
CRAM 3.1 read support Build and Test GATK 4 #5052: Pull request #9095 opened by cmnbroad
February 11, 2025 15:24 3m 35s cn_cram_31_support
cn_cram_31_support
February 11, 2025 15:24 3m 35s
PR #9095 CodeQL #918: by cmnbroad
February 11, 2025 15:22 8m 8s refs/pull/9095/head
refs/pull/9095/head
February 11, 2025 15:22 8m 8s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #1043: Scheduled
February 11, 2025 05:23 11m 34s master
master
February 11, 2025 05:23 11m 34s
Add samtools for file format testing. carrot-test-run-from-pr-comment #5426: Issue comment #9093 (comment) created by gatk-bot
February 10, 2025 21:30 10s
February 10, 2025 21:30 10s
Lots of little changes to Permutect dataset generation Build and Test GATK 4 #5051: Pull request #9094 opened by davidbenjamin
February 10, 2025 21:22 44m 45s db_permutect_data
db_permutect_data
February 10, 2025 21:22 44m 45s
PR #9094 CodeQL #917: by davidbenjamin
February 10, 2025 21:22 8m 6s refs/pull/9094/head
refs/pull/9094/head
February 10, 2025 21:22 8m 6s
Add samtools for file format testing. Build and Test GATK 4 #5050: Pull request #9093 synchronize by cmnbroad
February 10, 2025 20:54 50m 24s cn_add_samtools
cn_add_samtools
February 10, 2025 20:54 50m 24s
PR #9093 CodeQL #916: by cmnbroad
February 10, 2025 20:54 7m 46s refs/pull/9093/head
refs/pull/9093/head
February 10, 2025 20:54 7m 46s
Add samtools for file format testing. carrot-test-run-from-pr-comment #5425: Issue comment #9093 (comment) created by gatk-bot
February 10, 2025 20:27 10s
February 10, 2025 20:27 10s
Add samtools for file format testing. Build and Test GATK 4 #5049: Pull request #9093 synchronize by cmnbroad
February 10, 2025 20:06 44m 21s cn_add_samtools
cn_add_samtools
February 10, 2025 20:06 44m 21s
PR #9093 CodeQL #915: by cmnbroad
February 10, 2025 20:06 7m 47s refs/pull/9093/head
refs/pull/9093/head
February 10, 2025 20:06 7m 47s
Add samtools for file format testing. Build and Test GATK 4 #5048: Pull request #9093 opened by cmnbroad
February 10, 2025 20:03 3m 35s cn_add_samtools
cn_add_samtools
February 10, 2025 20:03 3m 35s
PR #9093 CodeQL #914: by cmnbroad
February 10, 2025 20:03 1m 39s refs/pull/9093/head
refs/pull/9093/head
February 10, 2025 20:03 1m 39s
Push on ah_var_store CodeQL #913: by mcovarr
February 10, 2025 14:48 11m 11s ah_var_store
ah_var_store
February 10, 2025 14:48 11m 11s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #1042: Scheduled
February 10, 2025 05:24 11m 23s master
master
February 10, 2025 05:24 11m 23s
BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring. carrot-test-run-from-pr-comment #5424: Issue comment #9020 (comment) created by gatk-bot
February 9, 2025 14:49 9s
February 9, 2025 14:49 9s
BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring. Build and Test GATK 4 #5047: Pull request #9020 synchronize by takutosato
February 9, 2025 14:31 45m 44s ts_bqsr_read_group
ts_bqsr_read_group
February 9, 2025 14:31 45m 44s
PR #9020 CodeQL #912: by takutosato
February 9, 2025 14:31 11m 12s refs/pull/9020/head
refs/pull/9020/head
February 9, 2025 14:31 11m 12s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #1041: Scheduled
February 9, 2025 05:23 11m 45s master
master
February 9, 2025 05:23 11m 45s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #1040: Scheduled
February 8, 2025 05:23 11m 23s master
master
February 8, 2025 05:23 11m 23s
Fix exomes bug for 200 < # samples < 400 [VS-1533] Build and Test GATK 4 #5046: Pull request #9092 opened by mcovarr
February 7, 2025 23:19 5h 21m 34s vs_1553_exomes_bug
vs_1553_exomes_bug
February 7, 2025 23:19 5h 21m 34s