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fixup! CONTRIBUTING.md: add guide for first-time contributors #3

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merged 1 commit into from
Mar 6, 2018

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@dscho dscho commented Mar 6, 2018

A couple of suggested touchups.

Signed-off-by: Johannes Schindelin johannes.schindelin@gmx.de

A couple of suggested touchups.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
@derrickstolee derrickstolee merged commit ef77b24 into derrickstolee:contributing Mar 6, 2018
derrickstolee pushed a commit that referenced this pull request Apr 2, 2018
The function ce_write_entry() uses a 'self-initialised' variable
construct, for the symbol 'saved_namelen', to suppress a gcc
'-Wmaybe-uninitialized' warning, given that the warning is a false
positive.

For the purposes of this discussion, the ce_write_entry() function has
three code blocks of interest, that look like so:

        /* block #1 */
        if (ce->ce_flags & CE_STRIP_NAME) {
                saved_namelen = ce_namelen(ce);
                ce->ce_namelen = 0;
        }

        /* block #2 */
        /*
	 * several code blocks that contain, among others, calls
         * to copy_cache_entry_to_ondisk(ondisk, ce);
         */

        /* block #3 */
        if (ce->ce_flags & CE_STRIP_NAME) {
                ce->ce_namelen = saved_namelen;
                ce->ce_flags &= ~CE_STRIP_NAME;
        }

The warning implies that gcc thinks it is possible that the first
block is not entered, the calls to copy_cache_entry_to_ondisk()
could toggle the CE_STRIP_NAME flag on, thereby entering block #3
with saved_namelen unset. However, the copy_cache_entry_to_ondisk()
function does not write to ce->ce_flags (it only reads). gcc could
easily determine this, since that function is local to this file,
but it obviously doesn't.

In order to suppress this warning, we make it clear to the reader
(human and compiler), that block #3 will only be entered when the
first block has been entered, by introducing a new 'stripped_name'
boolean variable. We also take the opportunity to change the type
of 'saved_namelen' to 'unsigned int' to match ce->ce_namelen.

Signed-off-by: Ramsay Jones <ramsay@ramsayjones.plus.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Dec 26, 2019
…ev()

In 'builtin/name-rev.c' in the name_rev() function there is a loop
iterating over all parents of the given commit, and the loop body
looks like this:

  if (parent_number > 1) {
      if (generation > 0)
          // branch #1
          new_name = ...
      else
          // branch #2
          new_name = ...
      name_rev(parent, new_name, ...);
  } else {
      // branch #3
      name_rev(...);
  }

These conditions are not covered properly in the test suite.  As far
as purely test coverage goes, they are all executed several times over
in 't6120-describe.sh'.  However, they don't directly influence the
command's output, because the repository used in that test script
contains several branches and tags pointing somewhere into the middle
of the commit DAG, and thus result in a better name for the
to-be-named commit.  This can hide bugs: e.g. by replacing the
'new_name' parameter of the first recursive name_rev() call with
'tip_name' (effectively making both branch #1 and #2 a noop) 'git
name-rev --all' shows thousands of bogus names in the Git repository,
but the whole test suite still passes successfully.  In an early
version of a later patch in this series I managed to mess up all three
branches (at once!), but the test suite still passed.

So add a new test case that operates on the following history:

  A--------------master
   \            /
    \----------M2
     \        /
      \---M1-C
       \ /
        B

and names the commit 'B' to make sure that all three branches are
crucial to determine 'B's name:

  - There is only a single ref, so all names are based on 'master',
    without any undesired interference from other refs.

  - Each time name_rev() follows the second parent of a merge commit,
    it appends "^2" to the name.  Following 'master's second parent
    right at the start ensures that all commits on the ancestry path
    from 'master' to 'B' have a different base name from the original
    'tip_name' of the very first name_rev() invocation.  Currently,
    while name_rev() is recursive, it doesn't matter, but it will be
    necessary to properly cover all three branches after the recursion
    is eliminated later in this series.

  - Following 'M2's second parent makes sure that branch #2 (i.e. when
    'generation = 0') affects 'B's name.

  - Following the only parent of the non-merge commit 'C' ensures that
    branch #3 affects 'B's name, and that it increments 'generation'.

  - Coming from 'C' 'generation' is 1, thus following 'M1's second
    parent makes sure that branch #1 affects 'B's name.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Feb 7, 2020
Recent versions of the gcc and clang Address Sanitizer produce test
failures related to regexec(). This triggers with gcc-10 and clang-8
(but not gcc-9 nor clang-7). Running:

  make CC=gcc-10 SANITIZE=address test

results in failures in t4018, t3206, and t4062.

The cause seems to be that when built with ASan, we use a different
version of regexec() than normal. And this version doesn't understand
the REG_STARTEND flag. Here's my evidence supporting that.

The failure in t4062 is an ASan warning:

  expecting success of 4062.2 '-G matches':
  	git diff --name-only -G "^(0{64}){64}$" HEAD^ >out &&
  	test 4096-zeroes.txt = "$(cat out)"

  =================================================================
  ==672994==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x7fa76f672000 at pc 0x7fa7726f75b6 bp 0x7ffe41bdda70 sp 0x7ffe41bdd220
  READ of size 4097 at 0x7fa76f672000 thread T0
      #0 0x7fa7726f75b5  (/lib/x86_64-linux-gnu/libasan.so.6+0x4f5b5)
      #1 0x562ae0c9c40e in regexec_buf /home/peff/compile/git/git-compat-util.h:1117
      #2 0x562ae0c9c40e in diff_grep /home/peff/compile/git/diffcore-pickaxe.c:52
      #3 0x562ae0c9cc28 in pickaxe_match /home/peff/compile/git/diffcore-pickaxe.c:166
      [...]

In this case we're looking in a buffer which was mmap'd via
reuse_worktree_file(), and whose size is 4096 bytes. But libasan's
regex tries to look at byte 4097 anyway! If we tweak Git like this:

  diff --git a/diff.c b/diff.c
  index 8e2914c031..cfae60c120 100644
  --- a/diff.c
  +++ b/diff.c
  @@ -3880,7 +3880,7 @@ static int reuse_worktree_file(struct index_state *istate,
           */
          if (ce_uptodate(ce) ||
              (!lstat(name, &st) && !ie_match_stat(istate, ce, &st, 0)))
  -               return 1;
  +               return 0;

          return 0;
   }

to use a regular buffer (with a trailing NUL) instead of an mmap, then
the complaint goes away.

The other failures are actually diff output with an incorrect funcname
header. If I instrument xdiff to show the funcname matching like so:

  diff --git a/xdiff-interface.c b/xdiff-interface.c
  index 8509f9ea22..f6c3dc1986 100644
  --- a/xdiff-interface.c
  +++ b/xdiff-interface.c
  @@ -197,6 +197,7 @@ struct ff_regs {
   	struct ff_reg {
   		regex_t re;
   		int negate;
  +		char *printable;
   	} *array;
   };

  @@ -218,7 +219,12 @@ static long ff_regexp(const char *line, long len,

   	for (i = 0; i < regs->nr; i++) {
   		struct ff_reg *reg = regs->array + i;
  -		if (!regexec_buf(&reg->re, line, len, 2, pmatch, 0)) {
  +		int ret = regexec_buf(&reg->re, line, len, 2, pmatch, 0);
  +		warning("regexec %s:\n  regex: %s\n  buf: %.*s",
  +			ret == 0 ? "matched" : "did not match",
  +			reg->printable,
  +			(int)len, line);
  +		if (!ret) {
   			if (reg->negate)
   				return -1;
   			break;
  @@ -264,6 +270,7 @@ void xdiff_set_find_func(xdemitconf_t *xecfg, const char *value, int cflags)
   			expression = value;
   		if (regcomp(&reg->re, expression, cflags))
   			die("Invalid regexp to look for hunk header: %s", expression);
  +		reg->printable = xstrdup(expression);
   		free(buffer);
   		value = ep + 1;
   	}

then when compiling with ASan and gcc-10, running the diff from t4018.66
produces this:

  $ git diff -U1 cpp-skip-access-specifiers
  warning: regexec did not match:
    regex: ^[     ]*[A-Za-z_][A-Za-z_0-9]*:[[:space:]]*($|/[/*])
    buf: private:
  warning: regexec matched:
    regex: ^((::[[:space:]]*)?[A-Za-z_].*)$
    buf: private:
  diff --git a/cpp-skip-access-specifiers b/cpp-skip-access-specifiers
  index 4d4a9db..ebd6f42 100644
  --- a/cpp-skip-access-specifiers
  +++ b/cpp-skip-access-specifiers
  @@ -6,3 +6,3 @@ private:
          void DoSomething();
          int ChangeMe;
  };
          void DoSomething();
  -       int ChangeMe;
  +       int IWasChanged;
   };

That first regex should match (and is negated, so it should be telling
us _not_ to match "private:"). But it wouldn't if regexec() is looking
at the whole buffer, and not just the length-limited line we've fed to
regexec_buf(). So this is consistent again with REG_STARTEND being
ignored.

The correct output (compiling without ASan, or gcc-9 with Asan) looks
like this:

  warning: regexec matched:
    regex: ^[     ]*[A-Za-z_][A-Za-z_0-9]*:[[:space:]]*($|/[/*])
    buf: private:
  [...more lines that we end up not using...]
  warning: regexec matched:
    regex: ^((::[[:space:]]*)?[A-Za-z_].*)$
    buf: class RIGHT : public Baseclass
  diff --git a/cpp-skip-access-specifiers b/cpp-skip-access-specifiers
  index 4d4a9db..ebd6f42 100644
  --- a/cpp-skip-access-specifiers
  +++ b/cpp-skip-access-specifiers
  @@ -6,3 +6,3 @@ class RIGHT : public Baseclass
          void DoSomething();
  -       int ChangeMe;
  +       int IWasChanged;
   };

So it really does seem like libasan's regex engine is ignoring
REG_STARTEND. We should be able to work around it by compiling with
NO_REGEX, which would use our local regexec(). But to make matters even
more interesting, this isn't enough by itself.

Because ASan has support from the compiler, it doesn't seem to intercept
our call to regexec() at the dynamic library level. It actually
recognizes when we are compiling a call to regexec() and replaces it
with ASan-specific code at that point. And unlike most of our other
compat code, where we might have git_mmap() or similar, the actual
symbol name in the compiled compat/regex code is regexec(). So just
compiling with NO_REGEX isn't enough; we still end up in libasan!

We can work around that by having the preprocessor replace regexec with
git_regexec (both in the callers and in the actual implementation), and
we truly end up with a call to our custom regex code, even when
compiling with ASan. That's probably a good thing to do anyway, as it
means anybody looking at the symbols later (e.g., in a debugger) would
have a better indication of which function is which. So we'll do the
same for the other common regex functions (even though just regexec() is
enough to fix this ASan problem).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jun 5, 2020
In write_commit_graph_file() we now have one block of code filling the
array of 'struct chunk_info' with the IDs and sizes of chunks to be
written, and an other block of code calling the functions responsible
for writing individual chunks.  In case of optional chunks like Extra
Edge List an Base Graphs List there is also a condition checking
whether that chunk is necessary/desired, and that same condition is
repeated in both blocks of code.  This patch series is about to add
more optional chunks, so there would be even more repeated conditions.

Eliminate these repeated conditions by storing the function pointers
responsible for writing individual chunks in the 'struct chunk_info'
array as well, and calling them in a loop to write the commit-graph
file.  This will open up the possibility for a bit of foolproofing in
the following patch.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
derrickstolee pushed a commit that referenced this pull request Oct 8, 2020
The OFFSETOF_VAR(var, member) macro is implemented in terms of
offsetof(typeof(*var), member) with compilers that know typeof(),
but its fallback implemenation compares &(var->member) and (var) and
count the distance in bytes, i.e.

    ((uintptr_t)&(var)->member - (uintptr_t)(var))

MSVC's runtime check, when fed an uninitialized 'var', flags this as
a use of an uninitialized variable (and that is legit---uninitialized
contents of 'var' is subtracted) in a debug build.

After auditing all 6 uses of OFFSETOF_VAR(), 1 of them does feed a
potentially uninitialized 'var' to the macro in the beginning of the
for() loop:

    #define hashmap_for_each_entry(map, iter, var, member) \
            for (var = hashmap_iter_first_entry_offset(map, iter, \
                                                    OFFSETOF_VAR(var, member)); \
                    var; \
                    var = hashmap_iter_next_entry_offset(iter, \
                                                    OFFSETOF_VAR(var, member)))

We can work around this by making sure that var has _some_ value
when OFFSETOF_VAR() is called.  Strictly speaking, it invites
undefined behaviour to use NULL here if we end up with pointer
comparison, but MSVC runtime seems to be happy with it, and most
other systems have typeof() and don't even need pointer comparison
fallback code.

Signed-off-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Oct 8, 2020
Using the CMake support we added some time ago for real with Visual
Studio build revealed there were lot of usability improvements
possible, which have been carried out.

* js/cmake-vs:
  hashmap_for_each_entry(): workaround MSVC's runtime check failure #3
  cmake (Windows): recommend using Visual Studio's built-in CMake support
  cmake (Windows): initialize vcpkg/build dependencies automatically
  cmake (Windows): complain when encountering an unknown compiler
  cmake (Windows): let the `.dll` files be found when running the tests
  cmake: quote the path accurately when editing `test-lib.sh`
  cmake: fall back to using `vcpkg`'s `msgfmt.exe` on Windows
  cmake: ensure that the `vcpkg` packages are found on Windows
  cmake: do find Git for Windows' shell interpreter
  cmake: ignore files generated by CMake as run in Visual Studio
@dscho dscho deleted the contributing branch October 21, 2020 11:39
derrickstolee pushed a commit that referenced this pull request Dec 23, 2020
Test 5572.63 ("branch has no merge base with remote-tracking
counterpart") was introduced in 4d36f88 (submodule: do not pass null
OID to setup_revisions, 2018-05-24), as a regression test for the bug
this commit was fixing (preventing a 'fatal: bad object' error when the
current branch and the remote-tracking branch we are pulling have no
merge-base).

However, the commit message for 4d36f88 does not describe in which
real-life situation this bug was encountered. The brief discussion on the
mailing list [1] does not either.

The regression test is not really representative of a real-life
scenario: both the local repository and its upstream have only a single
commit, and the "no merge-base" scenario is simulated by recreating this
root commit in the local repository using 'git commit-tree' before
calling 'git pull --rebase --recurse-submodules'. The rebase succeeds
and results in the local branch being reset to the same root commit as
the upstream branch.

The fix in 4d36f88 modifies 'submodule.c::submodule_touches_in_range'
so that if 'excl_oid' is null, which is the case when the 'git merge-base
--fork-point' invocation in 'builtin/pull.c::get_rebase_fork_point'
errors (no fork-point), then instead of 'incl_oid --not excl_oid' being
passed to setup_revisions, only 'incl_oid' is passed, and
'submodule_touches_in_range' examines 'incl_oid' and all its ancestors
to verify that they do not touch the submodule.

In test 5572.63, the recreated lone root commit in the local repository is
thus the only commit being examined by 'submodule_touches_in_range', and
this commit *adds* the submodule. However, 'submodule_touches_in_range'
*succeeds* because 'combine-diff.c::diff_tree_combined' (see the
backtrace below) returns early since this commit is the root commit
and has no parents.

  #0  diff_tree_combined at combine-diff.c:1494
  #1  0x0000000100150cbe in diff_tree_combined_merge at combine-diff.c:1649
  #2  0x00000001002c7147 in collect_changed_submodules at submodule.c:869
  #3  0x00000001002c7d6f in submodule_touches_in_range at submodule.c:1268
  #4  0x00000001000ad58b in cmd_pull at builtin/pull.c:1040

In light of all this, add a note in t5572 documenting this peculiar
test.

[1] https://lore.kernel.org/git/20180524204729.19896-1-jonathantanmy@google.com/t/#u

Signed-off-by: Philippe Blain <levraiphilippeblain@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee added a commit that referenced this pull request Jan 4, 2021
The previous change reduced time spent in strlen() while comparing
consecutive paths in verify_cache(), but we can do better. The
conditional checks the existence of a directory separator at the correct
location, but only after doing a string comparison. Swap the order to be
logically equivalent but perform fewer string comparisons.

To test the effect on performance, I used a repository with over three
million paths in the index. I then ran the following command on repeat:

  git -c index.threads=1 commit --amend --allow-empty --no-edit

Here are the measurements over 10 runs after a 5-run warmup:

  Benchmark #1: v2.30.0
    Time (mean ± σ):     854.5 ms ±  18.2 ms
    Range (min … max):   825.0 ms … 892.8 ms

  Benchmark #2: Previous change
    Time (mean ± σ):     833.2 ms ±  10.3 ms
    Range (min … max):   815.8 ms … 849.7 ms

  Benchmark #3: This change
    Time (mean ± σ):     815.5 ms ±  18.1 ms
    Range (min … max):   795.4 ms … 849.5 ms

This change is 2% faster than the previous change and 5% faster than
v2.30.0.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 4, 2021
The previous change reduced time spent in strlen() while comparing
consecutive paths in verify_cache(), but we can do better. The
conditional checks the existence of a directory separator at the correct
location, but only after doing a string comparison. Swap the order to be
logically equivalent but perform fewer string comparisons.

To test the effect on performance, I used a repository with over three
million paths in the index. I then ran the following command on repeat:

  git -c index.threads=1 commit --amend --allow-empty --no-edit

Here are the measurements over 10 runs after a 5-run warmup:

  Benchmark #1: v2.30.0
    Time (mean ± σ):     854.5 ms ±  18.2 ms
    Range (min … max):   825.0 ms … 892.8 ms

  Benchmark #2: Previous change
    Time (mean ± σ):     833.2 ms ±  10.3 ms
    Range (min … max):   815.8 ms … 849.7 ms

  Benchmark #3: This change
    Time (mean ± σ):     815.5 ms ±  18.1 ms
    Range (min … max):   795.4 ms … 849.5 ms

This change is 2% faster than the previous change and 5% faster than
v2.30.0.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 7, 2021
The previous change reduced time spent in strlen() while comparing
consecutive paths in verify_cache(), but we can do better. The
conditional checks the existence of a directory separator at the correct
location, but only after doing a string comparison. Swap the order to be
logically equivalent but perform fewer string comparisons.

To test the effect on performance, I used a repository with over three
million paths in the index. I then ran the following command on repeat:

  git -c index.threads=1 commit --amend --allow-empty --no-edit

Here are the measurements over 10 runs after a 5-run warmup:

  Benchmark #1: v2.30.0
    Time (mean ± σ):     854.5 ms ±  18.2 ms
    Range (min … max):   825.0 ms … 892.8 ms

  Benchmark #2: Previous change
    Time (mean ± σ):     833.2 ms ±  10.3 ms
    Range (min … max):   815.8 ms … 849.7 ms

  Benchmark #3: This change
    Time (mean ± σ):     815.5 ms ±  18.1 ms
    Range (min … max):   795.4 ms … 849.5 ms

This change is 2% faster than the previous change and 5% faster than
v2.30.0.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 20, 2021
The previous change reduced time spent in strlen() while comparing
consecutive paths in verify_cache(), but we can do better. The
conditional checks the existence of a directory separator at the correct
location, but only after doing a string comparison. Swap the order to be
logically equivalent but perform fewer string comparisons.

To test the effect on performance, I used a repository with over three
million paths in the index. I then ran the following command on repeat:

  git -c index.threads=1 commit --amend --allow-empty --no-edit

Here are the measurements over 10 runs after a 5-run warmup:

  Benchmark #1: v2.30.0
    Time (mean ± σ):     854.5 ms ±  18.2 ms
    Range (min … max):   825.0 ms … 892.8 ms

  Benchmark #2: Previous change
    Time (mean ± σ):     833.2 ms ±  10.3 ms
    Range (min … max):   815.8 ms … 849.7 ms

  Benchmark #3: This change
    Time (mean ± σ):     815.5 ms ±  18.1 ms
    Range (min … max):   795.4 ms … 849.5 ms

This change is 2% faster than the previous change and 5% faster than
v2.30.0.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
By testing 'git -c core.fsmonitor= status -uno', we can check for the
simplest index operations that can be made sparse-aware. The necessary
implementation details are already integrated with sparse-checkout, so
modify command_requires_full_index to be zero for cmd_status().

By running the debugger for 'git status -uno' after that change, we find
two instances of ensure_full_index() that were added for extra safety,
but can be removed without issue.

In refresh_index(), we loop through the index entries. The
refresh_cache_ent() method copies the sparse directories into the
refreshed index without issue.

The loop within run_diff_files() skips things that are in stage 0 and
have skip-worktree enabled, so seems safe to disable ensure_full_index()
here.

TODO: performance numbers at this point are confusing:

Benchmark #1: full index (git -c core.fsmonitor= status -uno)
  Time (mean ± σ):      2.522 s ±  0.079 s    [User: 1.511 s, System: 0.833 s]
  Range (min … max):    2.454 s …  2.715 s    10 runs

Benchmark #2: sparse index, old (git -c core.fsmonitor= status -uno)
  Time (mean ± σ):      3.370 s ±  0.036 s    [User: 3.166 s, System: 0.294 s]
  Range (min … max):    3.318 s …  3.428 s    10 runs

Benchmark #3: sparse index (git -c core.fsmonitor= status -uno)
  Time (mean ± σ):      5.196 s ±  0.056 s    [User: 5.189 s, System: 0.185 s]
  Range (min … max):    5.138 s …  5.269 s    10 runs

This shows that the previous change (Benchmark #2) had some overhead with
ensure_full_index() compared to a full index (Benchmark #1) but the
current change got much slower for some reason! Note that
ensure_full_index() is not called anywhere in this process! What is
going on?

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
By testing 'git -c core.fsmonitor= status -uno', we can check for the
simplest index operations that can be made sparse-aware. The necessary
implementation details are already integrated with sparse-checkout, so
modify command_requires_full_index to be zero for cmd_status().

By running the debugger for 'git status -uno' after that change, we find
two instances of ensure_full_index() that were added for extra safety,
but can be removed without issue.

In refresh_index(), we loop through the index entries. The
refresh_cache_ent() method copies the sparse directories into the
refreshed index without issue.

The loop within run_diff_files() skips things that are in stage 0 and
have skip-worktree enabled, so seems safe to disable ensure_full_index()
here.

TODO: performance numbers at this point are confusing:

Benchmark #1: full index (git -c core.fsmonitor= status -uno)
  Time (mean ± σ):      2.522 s ±  0.079 s    [User: 1.511 s, System: 0.833 s]
  Range (min … max):    2.454 s …  2.715 s    10 runs

Benchmark #2: sparse index, old (git -c core.fsmonitor= status -uno)
  Time (mean ± σ):      3.370 s ±  0.036 s    [User: 3.166 s, System: 0.294 s]
  Range (min … max):    3.318 s …  3.428 s    10 runs

Benchmark #3: sparse index (git -c core.fsmonitor= status -uno)
  Time (mean ± σ):      5.196 s ±  0.056 s    [User: 5.189 s, System: 0.185 s]
  Range (min … max):    5.138 s …  5.269 s    10 runs

This shows that the previous change (Benchmark #2) had some overhead with
ensure_full_index() compared to a full index (Benchmark #1) but the
current change got much slower for some reason! Note that
ensure_full_index() is not called anywhere in this process! What is
going on?

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee added a commit that referenced this pull request Jan 25, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee pushed a commit that referenced this pull request Feb 17, 2021
This is modelled on the version of handle_directory_level_conflicts()
from merge-recursive.c, but is massively simplified due to the following
factors:
  * strmap API provides simplifications over using direct hashmap
  * we have a dirs_removed field in struct rename_info that we have an
    easy way to populate from collect_merge_info(); this was already
    used in compute_rename_counts() and thus we do not need to check
    for condition #2.
  * The removal of condition #2 by handling it earlier in the code also
    obviates the need to check for condition #3 -- if both sides renamed
    a directory, meaning that the directory no longer exists on either
    side, then neither side could have added any new files to that
    directory, and thus there are no files whose locations we need to
    move due to such a directory rename.

In fact, the same logic that makes condition #3 irrelevant means
condition #1 is also irrelevant so we could drop this function.
However, it is cheap to check if both sides rename the same directory,
and doing so can save future computation.  So, simply remove any
directories that both sides renamed from the list of directory renames.

Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Feb 17, 2021
Add some timing instrumentation for both merge-ort and diffcore-rename;
I used these to measure and optimize performance in both, and several
future patch series will build on these to reduce the timings of some
select testcases.

=== Setup ===

The primary testcase I used involved rebasing a random topic in the
linux kernel (consisting of 35 patches) against an older version.  I
added two variants, one where I rename a toplevel directory, and another
where I only rebase one patch instead of the whole topic.  The setup is
as follows:

  $ git clone git://git.kernel.org/pub/scm/linux/kernel/git/stable/linux-stable.git
  $ git branch hwmon-updates fd8bdb23b91876ac1e624337bb88dc1dcc21d67e
  $ git branch hwmon-just-one fd8bdb23b91876ac1e624337bb88dc1dcc21d67e~34
  $ git branch base 4703d9119972bf586d2cca76ec6438f819ffa30e
  $ git switch -c 5.4-renames v5.4
  $ git mv drivers pilots  # Introduce over 26,000 renames
  $ git commit -m "Rename drivers/ to pilots/"
  $ git config merge.renameLimit 30000
  $ git config merge.directoryRenames true

=== Testcases ===

Now with REBASE standing for either "git rebase [--merge]" (using
merge-recursive) or "test-tool fast-rebase" (using merge-ort), the
testcases are:

Testcase #1: no-renames

  $ git checkout v5.4^0
  $ REBASE --onto HEAD base hwmon-updates

  Note: technically the name is misleading; there are some renames, but
  very few.  Rename detection only takes about half the overall time.

Testcase #2: mega-renames

  $ git checkout 5.4-renames^0
  $ REBASE --onto HEAD base hwmon-updates

Testcase #3: just-one-mega

  $ git checkout 5.4-renames^0
  $ REBASE --onto HEAD base hwmon-just-one

=== Timing results ===

Overall timings, using hyperfine (1 warmup run, 3 runs for mega-renames,
10 runs for the other two cases):

                       merge-recursive           merge-ort
    no-renames:       18.912 s ±  0.174 s    14.263 s ±  0.053 s
    mega-renames:   5964.031 s ± 10.459 s  5504.231 s ±  5.150 s
    just-one-mega:   149.583 s ±  0.751 s   158.534 s ±  0.498 s

A single re-run of each with some breakdowns:

                                    ---  no-renames  ---
                              merge-recursive   merge-ort
    overall runtime:              19.302 s        14.257 s
    inexact rename detection:      7.603 s         7.906 s
    everything else:              11.699 s         6.351 s

                                    --- mega-renames ---
                              merge-recursive   merge-ort
    overall runtime:            5950.195 s      5499.672 s
    inexact rename detection:   5746.309 s      5487.120 s
    everything else:             203.886 s        17.552 s

                                    --- just-one-mega ---
                              merge-recursive   merge-ort
    overall runtime:             151.001 s       158.582 s
    inexact rename detection:    143.448 s       157.835 s
    everything else:               7.553 s         0.747 s

=== Timing observations ===

0) Maximum speedup

The "everything else" row represents the maximum speedup we could
achieve if we were to somehow infinitely parallelize inexact rename
detection, but leave everything else alone.  The fact that this is so
much smaller than the real runtime (even in the case with virtually no
renames) makes it clear just how overwhelmingly large the time spent on
rename detection can be.

1) no-renames

1a) merge-ort is faster than merge-recursive, which is nice.  However,
this still should not be considered good enough.  Although the "merge"
backend to rebase (merge-recursive) is sometimes faster than the "apply"
backend, this is one of those cases where it is not.  In fact, even
merge-ort is slower.  The "apply" backend can complete this testcase in
    6.940 s ± 0.485 s
which is about 2x faster than merge-ort and 3x faster than
merge-recursive.  One goal of the merge-ort performance work will be to
make it faster than git-am on this (and similar) testcases.

2) mega-renames

2a) Obviously rename detection is a huge cost; it's where most the time
is spent.  We need to cut that down.  If we could somehow infinitely
parallelize it and drive its time to 0, the merge-recursive time would
drop to about 204s, and the merge-ort time would drop to about 17s.  I
think this particular stat shows I've subtly baked a couple performance
improvements into merge-ort and into fast-rebase already.

3) just-one-mega

3a) not much to say here, it just gives some flavor for how rebasing
only one patch compares to rebasing 35.

=== Goals ===

This patch is obviously just the beginning.  Here are some of my goals
that this measurement will help us achieve:

* Drive the cost of rename detection down considerably for merges
* After the above has been achieved, see if there are other slowness
  factors (which would have previously been overshadowed by rename
  detection costs) which we can then focus on and also optimize.
* Ensure our rebase testcase that requires little rename detection
  is noticeably faster with merge-ort than with apply-based rebase.

Signed-off-by: Elijah Newren <newren@gmail.com>
Acked-by: Taylor Blau <ttaylorr@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee added a commit that referenced this pull request Feb 17, 2021
The cache-tree extension was previously disabled with sparse indexes.
However, the cache-tree is an important performance feature for commands
like 'git status' and 'git add'. Integrate it with sparse directory
entries.

When writing a sparse index, completely clear and recalculate the cache
tree. By starting from scratch, the only integration necessary is to
check if we hit a sparse directory entry and create a leaf of the
cache-tree that has an entry_count of one and no subtrees.

Once the cache-tree exists within a sparse index, we finally get
improved performance. I test the sparse index performance using a
private monorepo with over 2.1 million files at HEAD, but with a
sparse-checkout definition that has only 68,000 paths in the populated
cone. The sparse index has about 2,000 sparse directory entries. I
compare three scenarios:

 1. Use the full index. The index size is ~186 MB.
 2. Use the sparse index. The index size is ~5.5 MB.
 3. Use a commit where HEAD matches the populated set. The full index
    size is ~5.3MB.

The third benchmark is included as a theoretical optimium for a
repository of the same object database.

First, a clean 'git status' improves from 3.1s to 240ms.

Benchmark #1: full index (git status)
  Time (mean ± σ):      3.167 s ±  0.036 s    [User: 2.006 s, System: 1.078 s]
  Range (min … max):    3.100 s …  3.208 s    10 runs

Benchmark #2: sparse index (git status)
  Time (mean ± σ):     239.5 ms ±   8.1 ms    [User: 189.4 ms, System: 226.8 ms]
  Range (min … max):   226.0 ms … 251.9 ms    13 runs

Benchmark #3: small tree (git status)
  Time (mean ± σ):     195.3 ms ±   4.5 ms    [User: 116.5 ms, System: 84.4 ms]
  Range (min … max):   188.8 ms … 202.8 ms    15 runs

The optimimum is still 45ms faster. This is due in part to the 2,000+
sparse directory entries, but there might be other optimizations to make
in the sparse-index case. In particular, I find that this performance
difference disappears when I disable FS Monitor, which is somewhat
disabled in the sparse-index case, but might still be adding overhead.

The performance numbers for 'git add .' are much closer to optimal:

Benchmark #1: full index (git add .)
  Time (mean ± σ):      3.076 s ±  0.022 s    [User: 2.065 s, System: 0.943 s]
  Range (min … max):    3.044 s …  3.116 s    10 runs

Benchmark #2: sparse index (git add .)
  Time (mean ± σ):     218.0 ms ±   6.6 ms    [User: 195.7 ms, System: 206.6 ms]
  Range (min … max):   209.8 ms … 228.2 ms    13 runs

Benchmark #3: small tree (git add .)
  Time (mean ± σ):     217.6 ms ±   5.4 ms    [User: 131.9 ms, System: 86.7 ms]
  Range (min … max):   212.1 ms … 228.4 ms    14 runs

In this test, I also used "echo >>README.md" to append a line to the
README.md file, so the 'git add .' command is doing _something_ other
than a no-op. Without this edit (and FS Monitor enabled) the small
tree case again gains about 30ms on the sparse index case.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee pushed a commit that referenced this pull request Mar 24, 2021
…sponse

query_result can be be an empty strbuf (STRBUF_INIT) - in that case
trying to read 3 bytes triggers a buffer overflow read (as
query_result.buf = '\0').

Therefore we need to check query_result's length before trying to read 3
bytes.

This overflow was introduced in:
  940b94f (fsmonitor: log invocation of FSMonitor hook to trace2, 2021-02-03)
It was found when running the test-suite against ASAN, and can be most
easily reproduced with the following command:

make GIT_TEST_OPTS="-v" DEFAULT_TEST_TARGET="t7519-status-fsmonitor.sh" \
SANITIZE=address DEVELOPER=1 test

==2235==ERROR: AddressSanitizer: global-buffer-overflow on address 0x0000019e6e5e at pc 0x00000043745c bp 0x7fffd382c520 sp 0x7fffd382bcc8
READ of size 3 at 0x0000019e6e5e thread T0
    #0 0x43745b in MemcmpInterceptorCommon(void*, int (*)(void const*, void const*, unsigned long), void const*, void const*, unsigned long) /home/abuild/rpmbuild/BUILD/llvm-11.0.0.src/build/../projects/compiler-rt/lib/asan/../sanitizer_common/sanitizer_common_interceptors.inc:842:7
    #1 0x43786d in bcmp /home/abuild/rpmbuild/BUILD/llvm-11.0.0.src/build/../projects/compiler-rt/lib/asan/../sanitizer_common/sanitizer_common_interceptors.inc:887:10
    #2 0x80b146 in fsmonitor_is_trivial_response /home/ahunt/oss-fuzz/git/fsmonitor.c:192:10
    #3 0x80b146 in query_fsmonitor /home/ahunt/oss-fuzz/git/fsmonitor.c:175:7
    #4 0x80a749 in refresh_fsmonitor /home/ahunt/oss-fuzz/git/fsmonitor.c:267:21
    #5 0x80bad1 in tweak_fsmonitor /home/ahunt/oss-fuzz/git/fsmonitor.c:429:4
    #6 0x90f040 in read_index_from /home/ahunt/oss-fuzz/git/read-cache.c:2321:3
    #7 0x8e5d08 in repo_read_index_preload /home/ahunt/oss-fuzz/git/preload-index.c:164:15
    #8 0x52dd45 in prepare_index /home/ahunt/oss-fuzz/git/builtin/commit.c:363:6
    #9 0x52a188 in cmd_commit /home/ahunt/oss-fuzz/git/builtin/commit.c:1588:15
    #10 0x4ce77e in run_builtin /home/ahunt/oss-fuzz/git/git.c:453:11
    #11 0x4ccb18 in handle_builtin /home/ahunt/oss-fuzz/git/git.c:704:3
    #12 0x4cb01c in run_argv /home/ahunt/oss-fuzz/git/git.c:771:4
    #13 0x4cb01c in cmd_main /home/ahunt/oss-fuzz/git/git.c:902:19
    #14 0x6aca8d in main /home/ahunt/oss-fuzz/git/common-main.c:52:11
    #15 0x7fb027bf5349 in __libc_start_main (/lib64/libc.so.6+0x24349)
    #16 0x4206b9 in _start /home/abuild/rpmbuild/BUILD/glibc-2.26/csu/../sysdeps/x86_64/start.S:120

0x0000019e6e5e is located 2 bytes to the left of global variable 'strbuf_slopbuf' defined in 'strbuf.c:51:6' (0x19e6e60) of size 1
  'strbuf_slopbuf' is ascii string ''
0x0000019e6e5e is located 126 bytes to the right of global variable 'signals' defined in 'sigchain.c:11:31' (0x19e6be0) of size 512
SUMMARY: AddressSanitizer: global-buffer-overflow /home/abuild/rpmbuild/BUILD/llvm-11.0.0.src/build/../projects/compiler-rt/lib/asan/../sanitizer_common/sanitizer_common_interceptors.inc:842:7 in MemcmpInterceptorCommon(void*, int (*)(void const*, void const*, unsigned long), void const*, void const*, unsigned long)
Shadow bytes around the buggy address:
  0x000080334d70: f9 f9 f9 f9 00 f9 f9 f9 f9 f9 f9 f9 00 00 00 00
  0x000080334d80: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
  0x000080334d90: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
  0x000080334da0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
  0x000080334db0: 00 00 00 00 00 00 00 00 00 00 00 00 f9 f9 f9 f9
=>0x000080334dc0: f9 f9 f9 f9 f9 f9 f9 f9 f9 f9 f9[f9]01 f9 f9 f9
  0x000080334dd0: f9 f9 f9 f9 03 f9 f9 f9 f9 f9 f9 f9 02 f9 f9 f9
  0x000080334de0: f9 f9 f9 f9 00 f9 f9 f9 f9 f9 f9 f9 04 f9 f9 f9
  0x000080334df0: f9 f9 f9 f9 01 f9 f9 f9 f9 f9 f9 f9 00 00 00 00
  0x000080334e00: f9 f9 f9 f9 00 00 00 00 f9 f9 f9 f9 01 f9 f9 f9
  0x000080334e10: f9 f9 f9 f9 04 f9 f9 f9 f9 f9 f9 f9 00 f9 f9 f9
Shadow byte legend (one shadow byte represents 8 application bytes):
  Addressable:           00
  Partially addressable: 01 02 03 04 05 06 07
  Heap left redzone:       fa
  Freed heap region:       fd
  Stack left redzone:      f1
  Stack mid redzone:       f2
  Stack right redzone:     f3
  Stack after return:      f5
  Stack use after scope:   f8
  Global redzone:          f9
  Global init order:       f6
  Poisoned by user:        f7
  Container overflow:      fc
  Array cookie:            ac
  Intra object redzone:    bb
  ASan internal:           fe
  Left alloca redzone:     ca
  Right alloca redzone:    cb
  Shadow gap:              cc

Signed-off-by: Andrzej Hunt <ajrhunt@google.com>
Acked-by: Jeff Hostetler <jeffhost@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Apr 10, 2021
shorten_unambiguous_ref() returns an allocated string. We have to
track it separately from the const refname.

This leak has existed since:
9ab55da (git symbolic-ref --delete $symref, 2012-10-21)

This leak was found when running t0001 with LSAN, see also LSAN output
below:

Direct leak of 19 byte(s) in 1 object(s) allocated from:
    #0 0x486514 in strdup /home/abuild/rpmbuild/BUILD/llvm-11.0.0.src/build/../projects/compiler-rt/lib/asan/asan_interceptors.cpp:452:3
    #1 0x9ab048 in xstrdup /home/ahunt/oss-fuzz/git/wrapper.c:29:14
    #2 0x8b452f in refs_shorten_unambiguous_ref /home/ahunt/oss-fuzz/git/refs.c
    #3 0x8b47e8 in shorten_unambiguous_ref /home/ahunt/oss-fuzz/git/refs.c:1287:9
    #4 0x679fce in check_symref /home/ahunt/oss-fuzz/git/builtin/symbolic-ref.c:28:14
    #5 0x679ad8 in cmd_symbolic_ref /home/ahunt/oss-fuzz/git/builtin/symbolic-ref.c:70:9
    #6 0x4cd60d in run_builtin /home/ahunt/oss-fuzz/git/git.c:453:11
    #7 0x4cb2da in handle_builtin /home/ahunt/oss-fuzz/git/git.c:704:3
    #8 0x4ccc37 in run_argv /home/ahunt/oss-fuzz/git/git.c:771:4
    #9 0x4cac29 in cmd_main /home/ahunt/oss-fuzz/git/git.c:902:19
    #10 0x69cc6e in main /home/ahunt/oss-fuzz/git/common-main.c:52:11
    #11 0x7f98388a4349 in __libc_start_main (/lib64/libc.so.6+0x24349)

Signed-off-by: Andrzej Hunt <ajrhunt@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Apr 10, 2021
dwim_ref() allocs a new string into ref. Instead of setting to NULL to
discard it, we can FREE_AND_NULL.

This leak appears to have been introduced in:
4cf76f6 (builtin/reset: compute checkout metadata for reset, 2020-03-16)

This leak was found when running t0001 with LSAN, see also LSAN output below:

Direct leak of 5 byte(s) in 1 object(s) allocated from:
    #0 0x486514 in strdup /home/abuild/rpmbuild/BUILD/llvm-11.0.0.src/build/../projects/compiler-rt/lib/asan/asan_interceptors.cpp:452:3
    #1 0x9a7108 in xstrdup /home/ahunt/oss-fuzz/git/wrapper.c:29:14
    #2 0x8add6b in expand_ref /home/ahunt/oss-fuzz/git/refs.c:670:12
    #3 0x8ad777 in repo_dwim_ref /home/ahunt/oss-fuzz/git/refs.c:644:22
    #4 0x6394af in dwim_ref /home/ahunt/oss-fuzz/git/./refs.h:162:9
    #5 0x637e5c in cmd_reset /home/ahunt/oss-fuzz/git/builtin/reset.c:426:4
    #6 0x4cd60d in run_builtin /home/ahunt/oss-fuzz/git/git.c:453:11
    #7 0x4cb2da in handle_builtin /home/ahunt/oss-fuzz/git/git.c:704:3
    #8 0x4ccc37 in run_argv /home/ahunt/oss-fuzz/git/git.c:771:4
    #9 0x4cac29 in cmd_main /home/ahunt/oss-fuzz/git/git.c:902:19
    #10 0x69c5ce in main /home/ahunt/oss-fuzz/git/common-main.c:52:11
    #11 0x7f57ebb9d349 in __libc_start_main (/lib64/libc.so.6+0x24349)

Signed-off-by: Andrzej Hunt <ajrhunt@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Aug 10, 2021
- cmd_rebase populates rebase_options.strategy with newly allocated
  strings, hence we need to free those strings at the end of cmd_rebase
  to avoid a leak.
- In some cases: get_replay_opts() is called, which prepares replay_opts
  using data from rebase_options. We used to simply copy the pointer
  from rebase_options.strategy,  however that would now result in a
  double-free because sequencer_remove_state() is eventually used to
  free replay_opts.strategy. To avoid this we xstrdup() strategy when
  adding it to replay_opts.

The original leak happens because we always populate
rebase_options.strategy, but we don't always enter the path that calls
get_replay_opts() and later sequencer_remove_state() - in  other words
we'd always allocate a new string into rebase_options.strategy but
only sometimes did we free it. We now make sure that rebase_options
and replay_opts both own their own copies of strategy, and each copy
is free'd independently.

This was first seen when running t0021 with LSAN, but t2012 helped catch
the fact that we can't just free(options.strategy) at the end of
cmd_rebase (as that can cause a double-free). LSAN output from t0021:

LSAN output from t0021:

Direct leak of 4 byte(s) in 1 object(s) allocated from:
    #0 0x486804 in strdup ../projects/compiler-rt/lib/asan/asan_interceptors.cpp:452:3
    #1 0xa71eb8 in xstrdup wrapper.c:29:14
    #2 0x61b1cc in cmd_rebase builtin/rebase.c:1779:22
    #3 0x4ce83e in run_builtin git.c:475:11
    #4 0x4ccafe in handle_builtin git.c:729:3
    #5 0x4cb01c in run_argv git.c:818:4
    #6 0x4cb01c in cmd_main git.c:949:19
    #7 0x6b3fad in main common-main.c:52:11
    #8 0x7f267b512349 in __libc_start_main (/lib64/libc.so.6+0x24349)

SUMMARY: AddressSanitizer: 4 byte(s) leaked in 1 allocation(s).

Signed-off-by: Andrzej Hunt <andrzej@ahunt.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Aug 10, 2021
setup_unpack_trees_porcelain() populates various fields on
unpack_tree_opts, we need to call clear_unpack_trees_porcelain() to
avoid leaking them. Specifically, we used to leak
unpack_tree_opts.msgs_to_free.

We have to do this in leave_reset_head because there are multiple
scenarios where unpack_tree_opts has already been configured, followed
by a 'goto leave_reset_head'. But we can also 'goto leave_reset_head'
prior to having initialised unpack_tree_opts via memset(..., 0, ...).
Therefore we also move unpack_tree_opts initialisation to the start of
reset_head(), and convert it to use brace initialisation - which
guarantees that we can never clear an uninitialised unpack_tree_opts.
clear_unpack_tree_opts() is always safe to call as long as
unpack_tree_opts is at least zero-initialised, i.e. it does not depend
on a previous call to setup_unpack_trees_porcelain().

LSAN output from t0021:

Direct leak of 192 byte(s) in 1 object(s) allocated from:
    #0 0x49ab49 in realloc ../projects/compiler-rt/lib/asan/asan_malloc_linux.cpp:164:3
    #1 0xa721e5 in xrealloc wrapper.c:126:8
    #2 0x9f7861 in strvec_push_nodup strvec.c:19:2
    #3 0x9f7861 in strvec_pushf strvec.c:39:2
    #4 0xa43e14 in setup_unpack_trees_porcelain unpack-trees.c:129:3
    #5 0x97e011 in reset_head reset.c:53:2
    #6 0x61dfa5 in cmd_rebase builtin/rebase.c:1991:9
    #7 0x4ce83e in run_builtin git.c:475:11
    #8 0x4ccafe in handle_builtin git.c:729:3
    #9 0x4cb01c in run_argv git.c:818:4
    #10 0x4cb01c in cmd_main git.c:949:19
    #11 0x6b3f3d in main common-main.c:52:11
    #12 0x7fa8addf3349 in __libc_start_main (/lib64/libc.so.6+0x24349)

Indirect leak of 147 byte(s) in 1 object(s) allocated from:
    #0 0x49ab49 in realloc ../projects/compiler-rt/lib/asan/asan_malloc_linux.cpp:164:3
    #1 0xa721e5 in xrealloc wrapper.c:126:8
    #2 0x9e8d54 in strbuf_grow strbuf.c:98:2
    #3 0x9e8d54 in strbuf_vaddf strbuf.c:401:3
    #4 0x9f7774 in strvec_pushf strvec.c:36:2
    #5 0xa43e14 in setup_unpack_trees_porcelain unpack-trees.c:129:3
    #6 0x97e011 in reset_head reset.c:53:2
    #7 0x61dfa5 in cmd_rebase builtin/rebase.c:1991:9
    #8 0x4ce83e in run_builtin git.c:475:11
    #9 0x4ccafe in handle_builtin git.c:729:3
    #10 0x4cb01c in run_argv git.c:818:4
    #11 0x4cb01c in cmd_main git.c:949:19
    #12 0x6b3f3d in main common-main.c:52:11
    #13 0x7fa8addf3349 in __libc_start_main (/lib64/libc.so.6+0x24349)

Indirect leak of 134 byte(s) in 1 object(s) allocated from:
    #0 0x49ab49 in realloc ../projects/compiler-rt/lib/asan/asan_malloc_linux.cpp:164:3
    #1 0xa721e5 in xrealloc wrapper.c:126:8
    #2 0x9e8d54 in strbuf_grow strbuf.c:98:2
    #3 0x9e8d54 in strbuf_vaddf strbuf.c:401:3
    #4 0x9f7774 in strvec_pushf strvec.c:36:2
    #5 0xa43fe4 in setup_unpack_trees_porcelain unpack-trees.c:168:3
    #6 0x97e011 in reset_head reset.c:53:2
    #7 0x61dfa5 in cmd_rebase builtin/rebase.c:1991:9
    #8 0x4ce83e in run_builtin git.c:475:11
    #9 0x4ccafe in handle_builtin git.c:729:3
    #10 0x4cb01c in run_argv git.c:818:4
    #11 0x4cb01c in cmd_main git.c:949:19
    #12 0x6b3f3d in main common-main.c:52:11
    #13 0x7fa8addf3349 in __libc_start_main (/lib64/libc.so.6+0x24349)

Indirect leak of 130 byte(s) in 1 object(s) allocated from:
    #0 0x49ab49 in realloc ../projects/compiler-rt/lib/asan/asan_malloc_linux.cpp:164:3
    #1 0xa721e5 in xrealloc wrapper.c:126:8
    #2 0x9e8d54 in strbuf_grow strbuf.c:98:2
    #3 0x9e8d54 in strbuf_vaddf strbuf.c:401:3
    #4 0x9f7774 in strvec_pushf strvec.c:36:2
    #5 0xa43f20 in setup_unpack_trees_porcelain unpack-trees.c:150:3
    #6 0x97e011 in reset_head reset.c:53:2
    #7 0x61dfa5 in cmd_rebase builtin/rebase.c:1991:9
    #8 0x4ce83e in run_builtin git.c:475:11
    #9 0x4ccafe in handle_builtin git.c:729:3
    #10 0x4cb01c in run_argv git.c:818:4
    #11 0x4cb01c in cmd_main git.c:949:19
    #12 0x6b3f3d in main common-main.c:52:11
    #13 0x7fa8addf3349 in __libc_start_main (/lib64/libc.so.6+0x24349)

SUMMARY: AddressSanitizer: 603 byte(s) leaked in 4 allocation(s).

Signed-off-by: Andrzej Hunt <andrzej@ahunt.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Oct 7, 2021
In a sparse index it is possible for the tree that is being verified
to be freed while it is being verified. This happens when the index is
sparse but the cache tree is not and index_name_pos() looks up a path
from the cache tree that is a descendant of a sparse index entry. That
triggers a call to ensure_full_index() which frees the cache tree that
is being verified.  Carrying on trying to verify the tree after this
results in a use-after-free bug. Instead restart the verification if a
sparse index is converted to a full index. This bug is triggered by a
call to reset_head() in "git rebase --apply". Thanks to René Scharfe
and Derick Stolee for their help analyzing the problem.

==74345==ERROR: AddressSanitizer: heap-use-after-free on address 0x606000001b20 at pc 0x557cbe82d3a2 bp 0x7ffdfee08090 sp 0x7ffdfee08080
READ of size 4 at 0x606000001b20 thread T0
    #0 0x557cbe82d3a1 in verify_one /home/phil/src/git/cache-tree.c:863
    #1 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #2 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #3 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #4 0x557cbe830a2b in cache_tree_verify /home/phil/src/git/cache-tree.c:910
    #5 0x557cbea53741 in write_locked_index /home/phil/src/git/read-cache.c:3250
    #6 0x557cbeab7fdd in reset_head /home/phil/src/git/reset.c:87
    #7 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #8 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #9 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #10 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #11 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #12 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #13 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)
    #14 0x557cbe5bcb8d in _start (/home/phil/src/git/git+0x1b9b8d)

0x606000001b20 is located 0 bytes inside of 56-byte region [0x606000001b20,0x606000001b58)
freed by thread T0 here:
    #0 0x7fdd4bacff19 in __interceptor_free /build/gcc/src/gcc/libsanitizer/asan/asan_malloc_linux.cpp:127
    #1 0x557cbe82af60 in cache_tree_free /home/phil/src/git/cache-tree.c:35
    #2 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #3 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #4 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #5 0x557cbeb2557a in ensure_full_index /home/phil/src/git/sparse-index.c:310
    #6 0x557cbea45c4a in index_name_stage_pos /home/phil/src/git/read-cache.c:588
    #7 0x557cbe82ce37 in verify_one /home/phil/src/git/cache-tree.c:850
    #8 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #9 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #10 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #11 0x557cbe830a2b in cache_tree_verify /home/phil/src/git/cache-tree.c:910
    #12 0x557cbea53741 in write_locked_index /home/phil/src/git/read-cache.c:3250
    #13 0x557cbeab7fdd in reset_head /home/phil/src/git/reset.c:87
    #14 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #15 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #16 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #17 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #18 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #19 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #20 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)

previously allocated by thread T0 here:
    #0 0x7fdd4bad0459 in __interceptor_calloc /build/gcc/src/gcc/libsanitizer/asan/asan_malloc_linux.cpp:154
    #1 0x557cbebc1807 in xcalloc /home/phil/src/git/wrapper.c:140
    #2 0x557cbe82b7d8 in cache_tree /home/phil/src/git/cache-tree.c:17
    #3 0x557cbe82b7d8 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:763
    #4 0x557cbe82b837 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:764
    #5 0x557cbe82b837 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:764
    #6 0x557cbe8304e1 in prime_cache_tree /home/phil/src/git/cache-tree.c:779
    #7 0x557cbeab7fa7 in reset_head /home/phil/src/git/reset.c:85
    #8 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #9 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #10 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #11 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #12 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #13 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #14 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)

Signed-off-by: Phillip Wood <phillip.wood@dunelm.org.uk>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee pushed a commit that referenced this pull request Oct 7, 2021
In a sparse index it is possible for the tree that is being verified
to be freed while it is being verified. This happens when the index is
sparse but the cache tree is not and index_name_pos() looks up a path
from the cache tree that is a descendant of a sparse index entry. That
triggers a call to ensure_full_index() which frees the cache tree that
is being verified.  Carrying on trying to verify the tree after this
results in a use-after-free bug. Instead restart the verification if a
sparse index is converted to a full index. This bug is triggered by a
call to reset_head() in "git rebase --apply". Thanks to René Scharfe
and Derrick Stolee for their help analyzing the problem.

==74345==ERROR: AddressSanitizer: heap-use-after-free on address 0x606000001b20 at pc 0x557cbe82d3a2 bp 0x7ffdfee08090 sp 0x7ffdfee08080
READ of size 4 at 0x606000001b20 thread T0
    #0 0x557cbe82d3a1 in verify_one /home/phil/src/git/cache-tree.c:863
    #1 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #2 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #3 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #4 0x557cbe830a2b in cache_tree_verify /home/phil/src/git/cache-tree.c:910
    #5 0x557cbea53741 in write_locked_index /home/phil/src/git/read-cache.c:3250
    #6 0x557cbeab7fdd in reset_head /home/phil/src/git/reset.c:87
    #7 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #8 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #9 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #10 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #11 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #12 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #13 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)
    #14 0x557cbe5bcb8d in _start (/home/phil/src/git/git+0x1b9b8d)

0x606000001b20 is located 0 bytes inside of 56-byte region [0x606000001b20,0x606000001b58)
freed by thread T0 here:
    #0 0x7fdd4bacff19 in __interceptor_free /build/gcc/src/gcc/libsanitizer/asan/asan_malloc_linux.cpp:127
    #1 0x557cbe82af60 in cache_tree_free /home/phil/src/git/cache-tree.c:35
    #2 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #3 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #4 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #5 0x557cbeb2557a in ensure_full_index /home/phil/src/git/sparse-index.c:310
    #6 0x557cbea45c4a in index_name_stage_pos /home/phil/src/git/read-cache.c:588
    #7 0x557cbe82ce37 in verify_one /home/phil/src/git/cache-tree.c:850
    #8 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #9 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #10 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #11 0x557cbe830a2b in cache_tree_verify /home/phil/src/git/cache-tree.c:910
    #12 0x557cbea53741 in write_locked_index /home/phil/src/git/read-cache.c:3250
    #13 0x557cbeab7fdd in reset_head /home/phil/src/git/reset.c:87
    #14 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #15 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #16 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #17 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #18 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #19 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #20 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)

previously allocated by thread T0 here:
    #0 0x7fdd4bad0459 in __interceptor_calloc /build/gcc/src/gcc/libsanitizer/asan/asan_malloc_linux.cpp:154
    #1 0x557cbebc1807 in xcalloc /home/phil/src/git/wrapper.c:140
    #2 0x557cbe82b7d8 in cache_tree /home/phil/src/git/cache-tree.c:17
    #3 0x557cbe82b7d8 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:763
    #4 0x557cbe82b837 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:764
    #5 0x557cbe82b837 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:764
    #6 0x557cbe8304e1 in prime_cache_tree /home/phil/src/git/cache-tree.c:779
    #7 0x557cbeab7fa7 in reset_head /home/phil/src/git/reset.c:85
    #8 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #9 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #10 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #11 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #12 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #13 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #14 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)

Signed-off-by: Phillip Wood <phillip.wood@dunelm.org.uk>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
derrickstolee pushed a commit that referenced this pull request Oct 26, 2021
In a sparse index it is possible for the tree that is being verified
to be freed while it is being verified. This happens when the index is
sparse but the cache tree is not and index_name_pos() looks up a path
from the cache tree that is a descendant of a sparse index entry. That
triggers a call to ensure_full_index() which frees the cache tree that
is being verified.  Carrying on trying to verify the tree after this
results in a use-after-free bug. Instead restart the verification if a
sparse index is converted to a full index. This bug is triggered by a
call to reset_head() in "git rebase --apply". Thanks to René Scharfe
and Derrick Stolee for their help analyzing the problem.

==74345==ERROR: AddressSanitizer: heap-use-after-free on address 0x606000001b20 at pc 0x557cbe82d3a2 bp 0x7ffdfee08090 sp 0x7ffdfee08080
READ of size 4 at 0x606000001b20 thread T0
    #0 0x557cbe82d3a1 in verify_one /home/phil/src/git/cache-tree.c:863
    #1 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #2 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #3 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #4 0x557cbe830a2b in cache_tree_verify /home/phil/src/git/cache-tree.c:910
    #5 0x557cbea53741 in write_locked_index /home/phil/src/git/read-cache.c:3250
    #6 0x557cbeab7fdd in reset_head /home/phil/src/git/reset.c:87
    #7 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #8 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #9 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #10 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #11 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #12 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #13 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)
    #14 0x557cbe5bcb8d in _start (/home/phil/src/git/git+0x1b9b8d)

0x606000001b20 is located 0 bytes inside of 56-byte region [0x606000001b20,0x606000001b58)
freed by thread T0 here:
    #0 0x7fdd4bacff19 in __interceptor_free /build/gcc/src/gcc/libsanitizer/asan/asan_malloc_linux.cpp:127
    #1 0x557cbe82af60 in cache_tree_free /home/phil/src/git/cache-tree.c:35
    #2 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #3 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #4 0x557cbe82aee5 in cache_tree_free /home/phil/src/git/cache-tree.c:31
    #5 0x557cbeb2557a in ensure_full_index /home/phil/src/git/sparse-index.c:310
    #6 0x557cbea45c4a in index_name_stage_pos /home/phil/src/git/read-cache.c:588
    #7 0x557cbe82ce37 in verify_one /home/phil/src/git/cache-tree.c:850
    #8 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #9 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #10 0x557cbe82ca9d in verify_one /home/phil/src/git/cache-tree.c:840
    #11 0x557cbe830a2b in cache_tree_verify /home/phil/src/git/cache-tree.c:910
    #12 0x557cbea53741 in write_locked_index /home/phil/src/git/read-cache.c:3250
    #13 0x557cbeab7fdd in reset_head /home/phil/src/git/reset.c:87
    #14 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #15 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #16 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #17 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #18 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #19 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #20 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)

previously allocated by thread T0 here:
    #0 0x7fdd4bad0459 in __interceptor_calloc /build/gcc/src/gcc/libsanitizer/asan/asan_malloc_linux.cpp:154
    #1 0x557cbebc1807 in xcalloc /home/phil/src/git/wrapper.c:140
    #2 0x557cbe82b7d8 in cache_tree /home/phil/src/git/cache-tree.c:17
    #3 0x557cbe82b7d8 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:763
    #4 0x557cbe82b837 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:764
    #5 0x557cbe82b837 in prime_cache_tree_rec /home/phil/src/git/cache-tree.c:764
    #6 0x557cbe8304e1 in prime_cache_tree /home/phil/src/git/cache-tree.c:779
    #7 0x557cbeab7fa7 in reset_head /home/phil/src/git/reset.c:85
    #8 0x557cbe72147f in cmd_rebase builtin/rebase.c:2074
    #9 0x557cbe5bd151 in run_builtin /home/phil/src/git/git.c:461
    #10 0x557cbe5bd151 in handle_builtin /home/phil/src/git/git.c:714
    #11 0x557cbe5c0503 in run_argv /home/phil/src/git/git.c:781
    #12 0x557cbe5c0503 in cmd_main /home/phil/src/git/git.c:912
    #13 0x557cbe5bad28 in main /home/phil/src/git/common-main.c:52
    #14 0x7fdd4b82eb24 in __libc_start_main (/usr/lib/libc.so.6+0x27b24)

Signed-off-by: Phillip Wood <phillip.wood@dunelm.org.uk>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee added a commit that referenced this pull request Nov 2, 2021
When I was playing around with trace2 data and creating flamegraphs, I tried a `git fetch` call to see how the `git-remote-https` command would show up. What I didn't expect was an `ensure_full_index()` region!

It turns out that `git fetch` and `git pull` need to check the index for a `.gitmodules` file to see if it should recurse into any submodules. Here is the stack trace from a debugger:

```
#0  ensure_full_index (istate=0x555555ac1c80 <the_index>) at sparse-index.c:404
#1  0x000055555571a979 in do_read_index (istate=istate@entry=0x555555ac1c80 <the_index>, path=path@entry=0x555555ad7b90 ".git/index", must_exist=must_exist@entry=0) at read-cache.c:2386
#2  0x000055555571eb7d in do_read_index (must_exist=0, path=0x555555ad7b90 ".git/index", istate=0x555555ac1c80 <the_index>) at hash.h:244
#3  read_index_from (istate=0x555555ac1c80 <the_index>, path=0x555555ad7b90 ".git/index", gitdir=0x555555ad7b30 ".git") at read-cache.c:2426
#4  0x000055555573f4c2 in repo_read_index (repo=repo@entry=0x555555ac1da0 <the_repo>) at repository.c:286
#5  0x00005555556f14d0 in get_oid_with_context_1 (repo=repo@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", flags=flags@entry=0, prefix=prefix@entry=0x0, 
    oid=oid@entry=0x7fffffffdb00, oc=oc@entry=0x7fffffffda70) at object-name.c:1850
#6  0x00005555556f1f53 in get_oid_with_context (oc=0x7fffffffda70, oid=0x7fffffffdb00, flags=0, str=0x55555582c022 ":.gitmodules", repo=0x555555ac1da0 <the_repo>) at object-name.c:1947
#7  repo_get_oid (r=r@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", oid=oid@entry=0x7fffffffdb00) at object-name.c:1603
#8  0x000055555577330f in config_from_gitmodules (fn=fn@entry=0x555555773460 <gitmodules_fetch_config>, repo=0x555555ac1da0 <the_repo>, data=data@entry=0x7fffffffdb60) at submodule-config.c:650
#9  0x000055555577462d in config_from_gitmodules (data=0x7fffffffdb60, repo=<optimized out>, fn=0x555555773460 <gitmodules_fetch_config>) at submodule-config.c:638
#10 fetch_config_from_gitmodules (max_children=<optimized out>, recurse_submodules=<optimized out>) at submodule-config.c:800
#11 0x00005555555b9e41 in cmd_fetch (argc=1, argv=0x7fffffffe090, prefix=0x0) at builtin/fetch.c:1999
#12 0x0000555555573ff6 in run_builtin (argv=<optimized out>, argc=<optimized out>, p=<optimized out>) at git.c:528
#13 handle_builtin (argc=<optimized out>, argv=<optimized out>) at git.c:785
#14 0x000055555557528c in run_argv (argv=0x7fffffffddf0, argcp=0x7fffffffddfc) at git.c:857
#15 cmd_main (argc=<optimized out>, argv=<optimized out>) at git.c:993
#16 0x0000555555573ac8 in main (argc=3, argv=0x7fffffffe088) at common-main.c:52
```

The operations these commands use are guarded by items such as `index_name_pos()` and others. Since the `.gitmodules` file is always at root, we would not need to expand, anyway.
derrickstolee added a commit that referenced this pull request Nov 8, 2021
When I was playing around with trace2 data and creating flamegraphs, I tried a `git fetch` call to see how the `git-remote-https` command would show up. What I didn't expect was an `ensure_full_index()` region!

It turns out that `git fetch` and `git pull` need to check the index for a `.gitmodules` file to see if it should recurse into any submodules. Here is the stack trace from a debugger:

```
#0  ensure_full_index (istate=0x555555ac1c80 <the_index>) at sparse-index.c:404
#1  0x000055555571a979 in do_read_index (istate=istate@entry=0x555555ac1c80 <the_index>, path=path@entry=0x555555ad7b90 ".git/index", must_exist=must_exist@entry=0) at read-cache.c:2386
#2  0x000055555571eb7d in do_read_index (must_exist=0, path=0x555555ad7b90 ".git/index", istate=0x555555ac1c80 <the_index>) at hash.h:244
#3  read_index_from (istate=0x555555ac1c80 <the_index>, path=0x555555ad7b90 ".git/index", gitdir=0x555555ad7b30 ".git") at read-cache.c:2426
#4  0x000055555573f4c2 in repo_read_index (repo=repo@entry=0x555555ac1da0 <the_repo>) at repository.c:286
#5  0x00005555556f14d0 in get_oid_with_context_1 (repo=repo@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", flags=flags@entry=0, prefix=prefix@entry=0x0, 
    oid=oid@entry=0x7fffffffdb00, oc=oc@entry=0x7fffffffda70) at object-name.c:1850
#6  0x00005555556f1f53 in get_oid_with_context (oc=0x7fffffffda70, oid=0x7fffffffdb00, flags=0, str=0x55555582c022 ":.gitmodules", repo=0x555555ac1da0 <the_repo>) at object-name.c:1947
#7  repo_get_oid (r=r@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", oid=oid@entry=0x7fffffffdb00) at object-name.c:1603
#8  0x000055555577330f in config_from_gitmodules (fn=fn@entry=0x555555773460 <gitmodules_fetch_config>, repo=0x555555ac1da0 <the_repo>, data=data@entry=0x7fffffffdb60) at submodule-config.c:650
#9  0x000055555577462d in config_from_gitmodules (data=0x7fffffffdb60, repo=<optimized out>, fn=0x555555773460 <gitmodules_fetch_config>) at submodule-config.c:638
#10 fetch_config_from_gitmodules (max_children=<optimized out>, recurse_submodules=<optimized out>) at submodule-config.c:800
#11 0x00005555555b9e41 in cmd_fetch (argc=1, argv=0x7fffffffe090, prefix=0x0) at builtin/fetch.c:1999
#12 0x0000555555573ff6 in run_builtin (argv=<optimized out>, argc=<optimized out>, p=<optimized out>) at git.c:528
#13 handle_builtin (argc=<optimized out>, argv=<optimized out>) at git.c:785
#14 0x000055555557528c in run_argv (argv=0x7fffffffddf0, argcp=0x7fffffffddfc) at git.c:857
#15 cmd_main (argc=<optimized out>, argv=<optimized out>) at git.c:993
#16 0x0000555555573ac8 in main (argc=3, argv=0x7fffffffe088) at common-main.c:52
```

The operations these commands use are guarded by items such as `index_name_pos()` and others. Since the `.gitmodules` file is always at root, we would not need to expand, anyway.
derrickstolee added a commit that referenced this pull request Nov 10, 2021
When I was playing around with trace2 data and creating flamegraphs, I tried a `git fetch` call to see how the `git-remote-https` command would show up. What I didn't expect was an `ensure_full_index()` region!

It turns out that `git fetch` and `git pull` need to check the index for a `.gitmodules` file to see if it should recurse into any submodules. Here is the stack trace from a debugger:

```
#0  ensure_full_index (istate=0x555555ac1c80 <the_index>) at sparse-index.c:404
#1  0x000055555571a979 in do_read_index (istate=istate@entry=0x555555ac1c80 <the_index>, path=path@entry=0x555555ad7b90 ".git/index", must_exist=must_exist@entry=0) at read-cache.c:2386
#2  0x000055555571eb7d in do_read_index (must_exist=0, path=0x555555ad7b90 ".git/index", istate=0x555555ac1c80 <the_index>) at hash.h:244
#3  read_index_from (istate=0x555555ac1c80 <the_index>, path=0x555555ad7b90 ".git/index", gitdir=0x555555ad7b30 ".git") at read-cache.c:2426
#4  0x000055555573f4c2 in repo_read_index (repo=repo@entry=0x555555ac1da0 <the_repo>) at repository.c:286
#5  0x00005555556f14d0 in get_oid_with_context_1 (repo=repo@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", flags=flags@entry=0, prefix=prefix@entry=0x0, 
    oid=oid@entry=0x7fffffffdb00, oc=oc@entry=0x7fffffffda70) at object-name.c:1850
#6  0x00005555556f1f53 in get_oid_with_context (oc=0x7fffffffda70, oid=0x7fffffffdb00, flags=0, str=0x55555582c022 ":.gitmodules", repo=0x555555ac1da0 <the_repo>) at object-name.c:1947
#7  repo_get_oid (r=r@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", oid=oid@entry=0x7fffffffdb00) at object-name.c:1603
#8  0x000055555577330f in config_from_gitmodules (fn=fn@entry=0x555555773460 <gitmodules_fetch_config>, repo=0x555555ac1da0 <the_repo>, data=data@entry=0x7fffffffdb60) at submodule-config.c:650
#9  0x000055555577462d in config_from_gitmodules (data=0x7fffffffdb60, repo=<optimized out>, fn=0x555555773460 <gitmodules_fetch_config>) at submodule-config.c:638
#10 fetch_config_from_gitmodules (max_children=<optimized out>, recurse_submodules=<optimized out>) at submodule-config.c:800
#11 0x00005555555b9e41 in cmd_fetch (argc=1, argv=0x7fffffffe090, prefix=0x0) at builtin/fetch.c:1999
#12 0x0000555555573ff6 in run_builtin (argv=<optimized out>, argc=<optimized out>, p=<optimized out>) at git.c:528
#13 handle_builtin (argc=<optimized out>, argv=<optimized out>) at git.c:785
#14 0x000055555557528c in run_argv (argv=0x7fffffffddf0, argcp=0x7fffffffddfc) at git.c:857
#15 cmd_main (argc=<optimized out>, argv=<optimized out>) at git.c:993
#16 0x0000555555573ac8 in main (argc=3, argv=0x7fffffffe088) at common-main.c:52
```

The operations these commands use are guarded by items such as `index_name_pos()` and others. Since the `.gitmodules` file is always at root, we would not need to expand, anyway.
derrickstolee added a commit that referenced this pull request Nov 16, 2021
When I was playing around with trace2 data and creating flamegraphs, I tried a `git fetch` call to see how the `git-remote-https` command would show up. What I didn't expect was an `ensure_full_index()` region!

It turns out that `git fetch` and `git pull` need to check the index for a `.gitmodules` file to see if it should recurse into any submodules. Here is the stack trace from a debugger:

```
#0  ensure_full_index (istate=0x555555ac1c80 <the_index>) at sparse-index.c:404
#1  0x000055555571a979 in do_read_index (istate=istate@entry=0x555555ac1c80 <the_index>, path=path@entry=0x555555ad7b90 ".git/index", must_exist=must_exist@entry=0) at read-cache.c:2386
#2  0x000055555571eb7d in do_read_index (must_exist=0, path=0x555555ad7b90 ".git/index", istate=0x555555ac1c80 <the_index>) at hash.h:244
#3  read_index_from (istate=0x555555ac1c80 <the_index>, path=0x555555ad7b90 ".git/index", gitdir=0x555555ad7b30 ".git") at read-cache.c:2426
#4  0x000055555573f4c2 in repo_read_index (repo=repo@entry=0x555555ac1da0 <the_repo>) at repository.c:286
#5  0x00005555556f14d0 in get_oid_with_context_1 (repo=repo@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", flags=flags@entry=0, prefix=prefix@entry=0x0, 
    oid=oid@entry=0x7fffffffdb00, oc=oc@entry=0x7fffffffda70) at object-name.c:1850
#6  0x00005555556f1f53 in get_oid_with_context (oc=0x7fffffffda70, oid=0x7fffffffdb00, flags=0, str=0x55555582c022 ":.gitmodules", repo=0x555555ac1da0 <the_repo>) at object-name.c:1947
#7  repo_get_oid (r=r@entry=0x555555ac1da0 <the_repo>, name=name@entry=0x55555582c022 ":.gitmodules", oid=oid@entry=0x7fffffffdb00) at object-name.c:1603
#8  0x000055555577330f in config_from_gitmodules (fn=fn@entry=0x555555773460 <gitmodules_fetch_config>, repo=0x555555ac1da0 <the_repo>, data=data@entry=0x7fffffffdb60) at submodule-config.c:650
#9  0x000055555577462d in config_from_gitmodules (data=0x7fffffffdb60, repo=<optimized out>, fn=0x555555773460 <gitmodules_fetch_config>) at submodule-config.c:638
#10 fetch_config_from_gitmodules (max_children=<optimized out>, recurse_submodules=<optimized out>) at submodule-config.c:800
#11 0x00005555555b9e41 in cmd_fetch (argc=1, argv=0x7fffffffe090, prefix=0x0) at builtin/fetch.c:1999
#12 0x0000555555573ff6 in run_builtin (argv=<optimized out>, argc=<optimized out>, p=<optimized out>) at git.c:528
#13 handle_builtin (argc=<optimized out>, argv=<optimized out>) at git.c:785
#14 0x000055555557528c in run_argv (argv=0x7fffffffddf0, argcp=0x7fffffffddfc) at git.c:857
#15 cmd_main (argc=<optimized out>, argv=<optimized out>) at git.c:993
#16 0x0000555555573ac8 in main (argc=3, argv=0x7fffffffe088) at common-main.c:52
```

The operations these commands use are guarded by items such as `index_name_pos()` and others. Since the `.gitmodules` file is always at root, we would not need to expand, anyway.
derrickstolee pushed a commit that referenced this pull request Mar 15, 2022
Add "fast_unwind_on_malloc=0" to LSAN_OPTIONS to get more meaningful
stack traces from LSAN. This isn't required under ASAN which will emit
traces such as this one for a leak in "t/t0006-date.sh":

    $ ASAN_OPTIONS=detect_leaks=1 ./t0006-date.sh -vixd
    [...]
    Direct leak of 3 byte(s) in 1 object(s) allocated from:
        #0 0x488b94 in strdup (t/helper/test-tool+0x488b94)
        #1 0x9444a4 in xstrdup wrapper.c:29:14
        #2 0x5995fa in parse_date_format date.c:991:24
        #3 0x4d2056 in show_dates t/helper/test-date.c:39:2
        #4 0x4d174a in cmd__date t/helper/test-date.c:116:3
        #5 0x4cce89 in cmd_main t/helper/test-tool.c:127:11
        #6 0x4cd1e3 in main common-main.c:52:11
        #7 0x7fef3c695e49 in __libc_start_main csu/../csu/libc-start.c:314:16
        #8 0x422b09 in _start (t/helper/test-tool+0x422b09)

    SUMMARY: AddressSanitizer: 3 byte(s) leaked in 1 allocation(s).
    Aborted

Whereas LSAN would emit this instead:

    $ ./t0006-date.sh -vixd
    [...]
    Direct leak of 3 byte(s) in 1 object(s) allocated from:
        #0 0x4323b8 in malloc (t/helper/test-tool+0x4323b8)
        #1 0x7f2be1d614aa in strdup string/strdup.c:42:15

    SUMMARY: LeakSanitizer: 3 byte(s) leaked in 1 allocation(s).
    Aborted

Now we'll instead git this sensible stack trace under
LSAN. I.e. almost the same one (but starting with "malloc", as is
usual for LSAN) as under ASAN:

    Direct leak of 3 byte(s) in 1 object(s) allocated from:
        #0 0x4323b8 in malloc (t/helper/test-tool+0x4323b8)
        #1 0x7f012af5c4aa in strdup string/strdup.c:42:15
        #2 0x5cb164 in xstrdup wrapper.c:29:14
        #3 0x495ee9 in parse_date_format date.c:991:24
        #4 0x453aac in show_dates t/helper/test-date.c:39:2
        #5 0x453782 in cmd__date t/helper/test-date.c:116:3
        #6 0x451d95 in cmd_main t/helper/test-tool.c:127:11
        #7 0x451f1e in main common-main.c:52:11
        #8 0x7f012aef5e49 in __libc_start_main csu/../csu/libc-start.c:314:16
        #9 0x42e0a9 in _start (t/helper/test-tool+0x42e0a9)

    SUMMARY: LeakSanitizer: 3 byte(s) leaked in 1 allocation(s).
    Aborted

As the option name suggests this does make things slower, e.g. for
t0001-init.sh we're around 10% slower:

    $ hyperfine -L v 0,1 'LSAN_OPTIONS=fast_unwind_on_malloc={v} make T=t0001-init.sh' -r 3
    Benchmark 1: LSAN_OPTIONS=fast_unwind_on_malloc=0 make T=t0001-init.sh
      Time (mean ± σ):      2.135 s ±  0.015 s    [User: 1.951 s, System: 0.554 s]
      Range (min … max):    2.122 s …  2.152 s    3 runs

    Benchmark 2: LSAN_OPTIONS=fast_unwind_on_malloc=1 make T=t0001-init.sh
      Time (mean ± σ):      1.981 s ±  0.055 s    [User: 1.769 s, System: 0.488 s]
      Range (min … max):    1.941 s …  2.044 s    3 runs

    Summary
      'LSAN_OPTIONS=fast_unwind_on_malloc=1 make T=t0001-init.sh' ran
        1.08 ± 0.03 times faster than 'LSAN_OPTIONS=fast_unwind_on_malloc=0 make T=t0001-init.sh'

I think that's more than worth it to get the more meaningful stack
traces, we can always provide LSAN_OPTIONS=fast_unwind_on_malloc=0 for
one-off "fast" runs.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Mar 24, 2022
Add a failing test which demonstrates a regression in
a18d66c ("diff.c: free "buf" in diff_words_flush()", 2022-03-04),
the regression is discussed in detail in the subsequent commit. With
it running `git show --word-diff --color-moved` with SANITIZE=address
would emit:

	==31191==ERROR: AddressSanitizer: attempting double-free on 0x617000021100 in thread T0:
	    #0 0x49f0a2 in free (git+0x49f0a2)
	    #1 0x9b0e4d in diff_words_flush diff.c:2153:3
	    #2 0x9aed5d in fn_out_consume diff.c:2354:3
	    #3 0xe092ab in consume_one xdiff-interface.c:43:9
	    #4 0xe072eb in xdiff_outf xdiff-interface.c:76:10
	    #5 0xec7014 in xdl_emit_diffrec xdiff/xutils.c:53:6
	    [...]

	0x617000021100 is located 0 bytes inside of 768-byte region [0x617000021100,0x617000021400)
	freed by thread T0 here:
	    #0 0x49f0a2 in free (git+0x49f0a2)
	    [...(same stacktrace)...]

	previously allocated by thread T0 here:
	    #0 0x49f603 in __interceptor_realloc (git+0x49f603)
	    #1 0xde4da4 in xrealloc wrapper.c:126:8
	    #2 0x995dc5 in append_emitted_diff_symbol diff.c:794:2
	    #3 0x96c44a in emit_diff_symbol diff.c:1527:3
	    [...]

This was not caught by the test suite because we test `diff
--word-diff --color-moved` only so far.

Therefore, add a test for `show`, too.

Signed-off-by: Michael J Gruber <git@grubix.eu>
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Apr 7, 2022
In the preceding [1] (pack-objects: move revs out of
get_object_list(), 2022-03-22) the "repo_init_revisions()" was moved
to cmd_pack_objects() so that it unconditionally took place for all
invocations of "git pack-objects".

We'd thus start leaking memory, which is easily reproduced in
e.g. git.git by feeding e83c516 (Initial revision of "git", the
information manager from hell, 2005-04-07) to "git pack-objects";

    $ echo e83c516 | ./git pack-objects initial
    [...]
	==19130==ERROR: LeakSanitizer: detected memory leaks

	Direct leak of 7120 byte(s) in 1 object(s) allocated from:
	    #0 0x455308 in __interceptor_malloc (/home/avar/g/git/git+0x455308)
	    #1 0x75b399 in do_xmalloc /home/avar/g/git/wrapper.c:41:8
	    #2 0x75b356 in xmalloc /home/avar/g/git/wrapper.c:62:9
	    #3 0x5d7609 in prep_parse_options /home/avar/g/git/diff.c:5647:2
	    #4 0x5d415a in repo_diff_setup /home/avar/g/git/diff.c:4621:2
	    #5 0x6dffbb in repo_init_revisions /home/avar/g/git/revision.c:1853:2
	    #6 0x4f599d in cmd_pack_objects /home/avar/g/git/builtin/pack-objects.c:3980:2
	    #7 0x4592ca in run_builtin /home/avar/g/git/git.c:465:11
	    #8 0x457d81 in handle_builtin /home/avar/g/git/git.c:718:3
	    #9 0x458ca5 in run_argv /home/avar/g/git/git.c:785:4
	    #10 0x457b40 in cmd_main /home/avar/g/git/git.c:916:19
	    #11 0x562259 in main /home/avar/g/git/common-main.c:56:11
	    #12 0x7fce792ac7ec in __libc_start_main csu/../csu/libc-start.c:332:16
	    #13 0x4300f9 in _start (/home/avar/g/git/git+0x4300f9)

	SUMMARY: LeakSanitizer: 7120 byte(s) leaked in 1 allocation(s).
	Aborted

Narrowly fixing that commit would have been easy, just add call
repo_init_revisions() right before get_object_list(), which is
effectively what was done before that commit.

But an unstated constraint when setting it up early is that it was
needed for the subsequent [2] (pack-objects: parse --filter directly
into revs.filter, 2022-03-22), i.e. we might have a --filter
command-line option, and need to either have the "struct rev_info"
setup when we encounter that option, or later.

Let's just change the control flow so that we'll instead set up the
"struct rev_info" only when we need it. Doing so leads to a bit more
verbosity, but it's a lot clearer what we're doing and why.

An earlier version of this commit[3] went behind
opt_parse_list_objects_filter()'s back by faking up a "struct option"
before calling it. Let's avoid that and instead create a blessed API
for this pattern.

We could furthermore combine the two get_object_list() invocations
here by having repo_init_revisions() invoked on &pfd.revs, but I think
clearly separating the two makes the flow clearer. Likewise
redundantly but explicitly (i.e. redundant v.s. a "{ 0 }") "0" to
"have_revs" early in cmd_pack_objects().

While we're at it add parentheses around the arguments to the OPT_*
macros in in list-objects-filter-options.h, as we need to change those
lines anyway. It doesn't matter in this case, but is good general
practice.

1. https://lore.kernel.org/git/619b757d98465dbc4995bdc11a5282fbfcbd3daa.1647970119.git.gitgitgadget@gmail.com
2. https://lore.kernel.org/git/97de926904988b89b5663bd4c59c011a1723a8f5.1647970119.git.gitgitgadget@gmail.com
3. https://lore.kernel.org/git/patch-1.1-193534b0f07-20220325T121715Z-avarab@gmail.com/

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Sep 19, 2022
Since commit fcc07e9 (is_promisor_object(): free tree buffer after
parsing, 2021-04-13), we'll always free the buffers attached to a
"struct tree" after searching them for promisor links. But there's an
important case where we don't want to do so: if somebody else is already
using the tree!

This can happen during a "rev-list --missing=allow-promisor" traversal
in a partial clone that is missing one or more trees or blobs. The
backtrace for the free looks like this:

      #1 free_tree_buffer tree.c:147
      #2 add_promisor_object packfile.c:2250
      #3 for_each_object_in_pack packfile.c:2190
      #4 for_each_packed_object packfile.c:2215
      #5 is_promisor_object packfile.c:2272
      #6 finish_object__ma builtin/rev-list.c:245
      #7 finish_object builtin/rev-list.c:261
      #8 show_object builtin/rev-list.c:274
      #9 process_blob list-objects.c:63
      #10 process_tree_contents list-objects.c:145
      #11 process_tree list-objects.c:201
      #12 traverse_trees_and_blobs list-objects.c:344
      [...]

We're in the middle of walking through the entries of a tree object via
process_tree_contents(). We see a blob (or it could even be another tree
entry) that we don't have, so we call is_promisor_object() to check it.
That function loops over all of the objects in the promisor packfile,
including the tree we're currently walking. When we're done with it
there, we free the tree buffer. But as we return to the walk in
process_tree_contents(), it's still holding on to a pointer to that
buffer, via its tree_desc iterator, and it accesses the freed memory.

Even a trivial use of "--missing=allow-promisor" triggers this problem,
as the included test demonstrates (it's just a vanilla --blob:none
clone).

We can detect this case by only freeing the tree buffer if it was
allocated on our behalf. This is a little tricky since that happens
inside parse_object(), and it doesn't tell us whether the object was
already parsed, or whether it allocated the buffer itself. But by
checking for an already-parsed tree beforehand, we can distinguish the
two cases.

That feels a little hacky, and does incur an extra lookup in the
object-hash table. But that cost is fairly minimal compared to actually
loading objects (and since we're iterating the whole pack here, we're
likely to be loading most objects, rather than reusing cached results).

It may also be a good direction for this function in general, as there
are other possible optimizations that rely on doing some analysis before
parsing:

  - we could detect blobs and avoid reading their contents; they can't
    link to other objects, but parse_object() doesn't know that we don't
    care about checking their hashes.

  - we could avoid allocating object structs entirely for most objects
    (since we really only need them in the oidset), which would save
    some memory.

  - promisor commits could use the commit-graph rather than loading the
    object from disk

This commit doesn't do any of those optimizations, but I think it argues
that this direction is reasonable, rather than relying on parse_object()
and trying to teach it to give us more information about whether it
parsed.

The included test fails reliably under SANITIZE=address just when
running "rev-list --missing=allow-promisor". Checking the output isn't
strictly necessary to detect the bug, but it seems like a reasonable
addition given the general lack of coverage for "allow-promisor" in the
test suite.

Reported-by: Andrew Olsen <andrew.olsen@koordinates.com>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Sep 19, 2022
Fix a memory leak occuring in case of pathspec copy in preload_index.

Direct leak of 8 byte(s) in 8 object(s) allocated from:
    #0 0x7f0a353ead47 in __interceptor_malloc (/usr/lib/gcc/x86_64-pc-linux-gnu/11.3.0/libasan.so.6+0xb5d47)
    #1 0x55750995e840 in do_xmalloc /home/anthony/src/c/git/wrapper.c:51
    #2 0x55750995e840 in xmalloc /home/anthony/src/c/git/wrapper.c:72
    #3 0x55750970f824 in copy_pathspec /home/anthony/src/c/git/pathspec.c:684
    #4 0x557509717278 in preload_index /home/anthony/src/c/git/preload-index.c:135
    #5 0x55750975f21e in refresh_index /home/anthony/src/c/git/read-cache.c:1633
    #6 0x55750915b926 in cmd_status builtin/commit.c:1547
    #7 0x5575090e1680 in run_builtin /home/anthony/src/c/git/git.c:466
    #8 0x5575090e1680 in handle_builtin /home/anthony/src/c/git/git.c:720
    #9 0x5575090e284a in run_argv /home/anthony/src/c/git/git.c:787
    #10 0x5575090e284a in cmd_main /home/anthony/src/c/git/git.c:920
    #11 0x5575090dbf82 in main /home/anthony/src/c/git/common-main.c:56
    #12 0x7f0a348230ab  (/lib64/libc.so.6+0x290ab)

Signed-off-by: Anthony Delannoy <anthony.2lannoy@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Oct 24, 2022
In the tmp-objdir api, tmp_objdir_create will create a temporary
directory but also register signal handlers responsible for removing
the directory's contents and the directory itself. However, the
function responsible for recursively removing the contents and
directory, remove_dir_recurse() calls opendir(3) and closedir(3).
This can be problematic because these functions allocate and free
memory, which are not async-signal-safe functions. This can lead to
deadlocks.

One place we call tmp_objdir_create() is in git-receive-pack, where
we create a temporary quarantine directory "incoming". Incoming
objects will be written to this directory before they get moved to
the object directory.

We have observed this code leading to a deadlock:

	Thread 1 (Thread 0x7f621ba0b200 (LWP 326305)):
	#0  __lll_lock_wait_private (futex=futex@entry=0x7f621bbf8b80
		<main_arena>) at ./lowlevellock.c:35
	#1  0x00007f621baa635b in __GI___libc_malloc
		(bytes=bytes@entry=32816) at malloc.c:3064
	#2  0x00007f621bae9f49 in __alloc_dir (statp=0x7fff2ea7ed60,
		flags=0, close_fd=true, fd=5)
		at ../sysdeps/posix/opendir.c:118
	#3  opendir_tail (fd=5) at ../sysdeps/posix/opendir.c:69
	#4  __opendir (name=<optimized out>)
		at ../sysdeps/posix/opendir.c:92
	#5  0x0000557c19c77de1 in remove_dir_recurse ()
	git#6  0x0000557c19d81a4f in remove_tmp_objdir_on_signal ()
	#7  <signal handler called>
	git#8  _int_malloc (av=av@entry=0x7f621bbf8b80 <main_arena>,
		bytes=bytes@entry=7160) at malloc.c:4116
	git#9  0x00007f621baa62c9 in __GI___libc_malloc (bytes=7160)
		at malloc.c:3066
	git#10 0x00007f621bd1e987 in inflateInit2_ ()
		from /opt/gitlab/embedded/lib/libz.so.1
	git#11 0x0000557c19dbe5f4 in git_inflate_init ()
	git#12 0x0000557c19cee02a in unpack_compressed_entry ()
	git#13 0x0000557c19cf08cb in unpack_entry ()
	git#14 0x0000557c19cf0f32 in packed_object_info ()
	git#15 0x0000557c19cd68cd in do_oid_object_info_extended ()
	git#16 0x0000557c19cd6e2b in read_object_file_extended ()
	git#17 0x0000557c19cdec2f in parse_object ()
	git#18 0x0000557c19c34977 in lookup_commit_reference_gently ()
	git#19 0x0000557c19d69309 in mark_uninteresting ()
	git#20 0x0000557c19d2d180 in do_for_each_repo_ref_iterator ()
	git#21 0x0000557c19d21678 in for_each_ref ()
	git#22 0x0000557c19d6a94f in assign_shallow_commits_to_refs ()
	git#23 0x0000557c19bc02b2 in cmd_receive_pack ()
	git#24 0x0000557c19b29fdd in handle_builtin ()
	git#25 0x0000557c19b2a526 in cmd_main ()
	git#26 0x0000557c19b28ea2 in main ()

Since we can't do the cleanup in a portable and signal-safe way, skip
the cleanup when we're handling a signal.

This means that when signal handling, the temporary directory may not
get cleaned up properly. This is mitigated by b3cecf4 (tmp-objdir: new
API for creating temporary writable databases, 2021-12-06) which changed
the default name and allows gc to clean up these temporary directories.

In the event of a normal exit, we should still be cleaning up via the
atexit() handler.

Helped-by: Jeff King <peff@peff.net>
Signed-off-by: John Cai <johncai86@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jan 17, 2023
There is an out-of-bounds read possible when parsing gitattributes that
have an attribute that is 2^31+1 bytes long. This is caused due to an
integer overflow when we assign the result of strlen(3P) to an `int`,
where we use the wrapped-around value in a subsequent call to
memcpy(3P). The following code reproduces the issue:

    blob=$(perl -e 'print "a" x 2147483649 . " attr"' | git hash-object -w --stdin)
    git update-index --add --cacheinfo 100644,$blob,.gitattributes
    git check-attr --all file

    AddressSanitizer:DEADLYSIGNAL
    =================================================================
    ==8451==ERROR: AddressSanitizer: SEGV on unknown address 0x7f93efa00800 (pc 0x7f94f1f8f082 bp 0x7ffddb59b3a0 sp 0x7ffddb59ab28 T0)
    ==8451==The signal is caused by a READ memory access.
        #0 0x7f94f1f8f082  (/usr/lib/libc.so.6+0x176082)
        #1 0x7f94f2047d9c in __interceptor_strspn /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:752
        #2 0x560e190f7f26 in parse_attr_line attr.c:375
        #3 0x560e190f9663 in handle_attr_line attr.c:660
        #4 0x560e190f9ddd in read_attr_from_index attr.c:769
        #5 0x560e190f9f14 in read_attr attr.c:797
        #6 0x560e190fa24e in bootstrap_attr_stack attr.c:867
        #7 0x560e190fa4a5 in prepare_attr_stack attr.c:902
        #8 0x560e190fb5dc in collect_some_attrs attr.c:1097
        #9 0x560e190fb93f in git_all_attrs attr.c:1128
        #10 0x560e18e6136e in check_attr builtin/check-attr.c:67
        #11 0x560e18e61c12 in cmd_check_attr builtin/check-attr.c:183
        #12 0x560e18e15993 in run_builtin git.c:466
        #13 0x560e18e16397 in handle_builtin git.c:721
        #14 0x560e18e16b2b in run_argv git.c:788
        #15 0x560e18e17991 in cmd_main git.c:926
        #16 0x560e190ae2bd in main common-main.c:57
        #17 0x7f94f1e3c28f  (/usr/lib/libc.so.6+0x2328f)
        #18 0x7f94f1e3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #19 0x560e18e110e4 in _start ../sysdeps/x86_64/start.S:115

    AddressSanitizer can not provide additional info.
    SUMMARY: AddressSanitizer: SEGV (/usr/lib/libc.so.6+0x176082)
    ==8451==ABORTING

Fix this bug by converting the variable to a `size_t` instead.

Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jan 17, 2023
It is possible to trigger an integer overflow when parsing attribute
names when there are more than 2^31 of them for a single pattern. This
can either lead to us dying due to trying to request too many bytes:

     blob=$(perl -e 'print "f" . " a=" x 2147483649' | git hash-object -w --stdin)
     git update-index --add --cacheinfo 100644,$blob,.gitattributes
     git attr-check --all file

    =================================================================
    ==1022==ERROR: AddressSanitizer: requested allocation size 0xfffffff800000032 (0xfffffff800001038 after adjustments for alignment, red zones etc.) exceeds maximum supported size of 0x10000000000 (thread T0)
        #0 0x7fd3efabf411 in __interceptor_calloc /usr/src/debug/gcc/libsanitizer/asan/asan_malloc_linux.cpp:77
        #1 0x5563a0a1e3d3 in xcalloc wrapper.c:150
        #2 0x5563a058d005 in parse_attr_line attr.c:384
        #3 0x5563a058e661 in handle_attr_line attr.c:660
        #4 0x5563a058eddb in read_attr_from_index attr.c:769
        #5 0x5563a058ef12 in read_attr attr.c:797
        #6 0x5563a058f24c in bootstrap_attr_stack attr.c:867
        #7 0x5563a058f4a3 in prepare_attr_stack attr.c:902
        #8 0x5563a05905da in collect_some_attrs attr.c:1097
        #9 0x5563a059093d in git_all_attrs attr.c:1128
        #10 0x5563a02f636e in check_attr builtin/check-attr.c:67
        #11 0x5563a02f6c12 in cmd_check_attr builtin/check-attr.c:183
        #12 0x5563a02aa993 in run_builtin git.c:466
        #13 0x5563a02ab397 in handle_builtin git.c:721
        #14 0x5563a02abb2b in run_argv git.c:788
        #15 0x5563a02ac991 in cmd_main git.c:926
        #16 0x5563a05432bd in main common-main.c:57
        #17 0x7fd3ef82228f  (/usr/lib/libc.so.6+0x2328f)

    ==1022==HINT: if you don't care about these errors you may set allocator_may_return_null=1
    SUMMARY: AddressSanitizer: allocation-size-too-big /usr/src/debug/gcc/libsanitizer/asan/asan_malloc_linux.cpp:77 in __interceptor_calloc
    ==1022==ABORTING

Or, much worse, it can lead to an out-of-bounds write because we
underallocate and then memcpy(3P) into an array:

    perl -e '
        print "A " . "\rh="x2000000000;
        print "\rh="x2000000000;
        print "\rh="x294967294 . "\n"
    ' >.gitattributes
    git add .gitattributes
    git commit -am "evil attributes"

    $ git clone --quiet /path/to/repo
    =================================================================
    ==15062==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x602000002550 at pc 0x5555559884d5 bp 0x7fffffffbc60 sp 0x7fffffffbc58
    WRITE of size 8 at 0x602000002550 thread T0
        #0 0x5555559884d4 in parse_attr_line attr.c:393
        #1 0x5555559884d4 in handle_attr_line attr.c:660
        #2 0x555555988902 in read_attr_from_index attr.c:784
        #3 0x555555988902 in read_attr_from_index attr.c:747
        #4 0x555555988a1d in read_attr attr.c:800
        #5 0x555555989b0c in bootstrap_attr_stack attr.c:882
        #6 0x555555989b0c in prepare_attr_stack attr.c:917
        #7 0x555555989b0c in collect_some_attrs attr.c:1112
        #8 0x55555598b141 in git_check_attr attr.c:1126
        #9 0x555555a13004 in convert_attrs convert.c:1311
        #10 0x555555a95e04 in checkout_entry_ca entry.c:553
        #11 0x555555d58bf6 in checkout_entry entry.h:42
        #12 0x555555d58bf6 in check_updates unpack-trees.c:480
        #13 0x555555d5eb55 in unpack_trees unpack-trees.c:2040
        #14 0x555555785ab7 in checkout builtin/clone.c:724
        #15 0x555555785ab7 in cmd_clone builtin/clone.c:1384
        #16 0x55555572443c in run_builtin git.c:466
        #17 0x55555572443c in handle_builtin git.c:721
        #18 0x555555727872 in run_argv git.c:788
        #19 0x555555727872 in cmd_main git.c:926
        #20 0x555555721fa0 in main common-main.c:57
        #21 0x7ffff73f1d09 in __libc_start_main ../csu/libc-start.c:308
        #22 0x555555723f39 in _start (git+0x1cff39)

    0x602000002552 is located 0 bytes to the right of 2-byte region [0x602000002550,0x602000002552) allocated by thread T0 here:
        #0 0x7ffff768c037 in __interceptor_calloc ../../../../src/libsanitizer/asan/asan_malloc_linux.cpp:154
        #1 0x555555d7fff7 in xcalloc wrapper.c:150
        #2 0x55555598815f in parse_attr_line attr.c:384
        #3 0x55555598815f in handle_attr_line attr.c:660
        #4 0x555555988902 in read_attr_from_index attr.c:784
        #5 0x555555988902 in read_attr_from_index attr.c:747
        #6 0x555555988a1d in read_attr attr.c:800
        #7 0x555555989b0c in bootstrap_attr_stack attr.c:882
        #8 0x555555989b0c in prepare_attr_stack attr.c:917
        #9 0x555555989b0c in collect_some_attrs attr.c:1112
        #10 0x55555598b141 in git_check_attr attr.c:1126
        #11 0x555555a13004 in convert_attrs convert.c:1311
        #12 0x555555a95e04 in checkout_entry_ca entry.c:553
        #13 0x555555d58bf6 in checkout_entry entry.h:42
        #14 0x555555d58bf6 in check_updates unpack-trees.c:480
        #15 0x555555d5eb55 in unpack_trees unpack-trees.c:2040
        #16 0x555555785ab7 in checkout builtin/clone.c:724
        #17 0x555555785ab7 in cmd_clone builtin/clone.c:1384
        #18 0x55555572443c in run_builtin git.c:466
        #19 0x55555572443c in handle_builtin git.c:721
        #20 0x555555727872 in run_argv git.c:788
        #21 0x555555727872 in cmd_main git.c:926
        #22 0x555555721fa0 in main common-main.c:57
        #23 0x7ffff73f1d09 in __libc_start_main ../csu/libc-start.c:308

    SUMMARY: AddressSanitizer: heap-buffer-overflow attr.c:393 in parse_attr_line
    Shadow bytes around the buggy address:
      0x0c047fff8450: fa fa 00 02 fa fa 00 07 fa fa fd fd fa fa 00 00
      0x0c047fff8460: fa fa 02 fa fa fa fd fd fa fa 00 06 fa fa 05 fa
      0x0c047fff8470: fa fa fd fd fa fa 00 02 fa fa 06 fa fa fa 05 fa
      0x0c047fff8480: fa fa 07 fa fa fa fd fd fa fa 00 01 fa fa 00 02
      0x0c047fff8490: fa fa 00 03 fa fa 00 fa fa fa 00 01 fa fa 00 03
    =>0x0c047fff84a0: fa fa 00 01 fa fa 00 02 fa fa[02]fa fa fa fa fa
      0x0c047fff84b0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c047fff84c0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c047fff84d0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c047fff84e0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c047fff84f0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
    Shadow byte legend (one shadow byte represents 8 application bytes):
      Addressable:           00
      Partially addressable: 01 02 03 04 05 06 07
      Heap left redzone:       fa
      Freed heap region:       fd
      Stack left redzone:      f1
      Stack mid redzone:       f2
      Stack right redzone:     f3
      Stack after return:      f5
      Stack use after scope:   f8
      Global redzone:          f9
      Global init order:       f6
      Poisoned by user:        f7
      Container overflow:      fc
      Array cookie:            ac
      Intra object redzone:    bb
      ASan internal:           fe
      Left alloca redzone:     ca
      Right alloca redzone:    cb
      Shadow gap:              cc
    ==15062==ABORTING

Fix this bug by using `size_t` instead to count the number of attributes
so that this value cannot reasonably overflow without running out of
memory before already.

Reported-by: Markus Vervier <markus.vervier@x41-dsec.de>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jan 17, 2023
When using a padding specifier in the pretty format passed to git-log(1)
we need to calculate the string length in several places. These string
lengths are stored in `int`s though, which means that these can easily
overflow when the input lengths exceeds 2GB. This can ultimately lead to
an out-of-bounds write when these are used in a call to memcpy(3P):

        ==8340==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x7f1ec62f97fe at pc 0x7f2127e5f427 bp 0x7ffd3bd63de0 sp 0x7ffd3bd63588
    WRITE of size 1 at 0x7f1ec62f97fe thread T0
        #0 0x7f2127e5f426 in __interceptor_memcpy /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:827
        #1 0x5628e96aa605 in format_and_pad_commit pretty.c:1762
        #2 0x5628e96aa7f4 in format_commit_item pretty.c:1801
        #3 0x5628e97cdb24 in strbuf_expand strbuf.c:429
        #4 0x5628e96ab060 in repo_format_commit_message pretty.c:1869
        #5 0x5628e96acd0f in pretty_print_commit pretty.c:2161
        #6 0x5628e95a44c8 in show_log log-tree.c:781
        #7 0x5628e95a76ba in log_tree_commit log-tree.c:1117
        #8 0x5628e922bed5 in cmd_log_walk_no_free builtin/log.c:508
        #9 0x5628e922c35b in cmd_log_walk builtin/log.c:549
        #10 0x5628e922f1a2 in cmd_log builtin/log.c:883
        #11 0x5628e9106993 in run_builtin git.c:466
        #12 0x5628e9107397 in handle_builtin git.c:721
        #13 0x5628e9107b07 in run_argv git.c:788
        #14 0x5628e91088a7 in cmd_main git.c:923
        #15 0x5628e939d682 in main common-main.c:57
        #16 0x7f2127c3c28f  (/usr/lib/libc.so.6+0x2328f)
        #17 0x7f2127c3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #18 0x5628e91020e4 in _start ../sysdeps/x86_64/start.S:115

    0x7f1ec62f97fe is located 2 bytes to the left of 4831838265-byte region [0x7f1ec62f9800,0x7f1fe62f9839)
    allocated by thread T0 here:
        #0 0x7f2127ebe7ea in __interceptor_realloc /usr/src/debug/gcc/libsanitizer/asan/asan_malloc_linux.cpp:85
        #1 0x5628e98774d4 in xrealloc wrapper.c:136
        #2 0x5628e97cb01c in strbuf_grow strbuf.c:99
        #3 0x5628e97ccd42 in strbuf_addchars strbuf.c:327
        #4 0x5628e96aa55c in format_and_pad_commit pretty.c:1761
        #5 0x5628e96aa7f4 in format_commit_item pretty.c:1801
        #6 0x5628e97cdb24 in strbuf_expand strbuf.c:429
        #7 0x5628e96ab060 in repo_format_commit_message pretty.c:1869
        #8 0x5628e96acd0f in pretty_print_commit pretty.c:2161
        #9 0x5628e95a44c8 in show_log log-tree.c:781
        #10 0x5628e95a76ba in log_tree_commit log-tree.c:1117
        #11 0x5628e922bed5 in cmd_log_walk_no_free builtin/log.c:508
        #12 0x5628e922c35b in cmd_log_walk builtin/log.c:549
        #13 0x5628e922f1a2 in cmd_log builtin/log.c:883
        #14 0x5628e9106993 in run_builtin git.c:466
        #15 0x5628e9107397 in handle_builtin git.c:721
        #16 0x5628e9107b07 in run_argv git.c:788
        #17 0x5628e91088a7 in cmd_main git.c:923
        #18 0x5628e939d682 in main common-main.c:57
        #19 0x7f2127c3c28f  (/usr/lib/libc.so.6+0x2328f)
        #20 0x7f2127c3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #21 0x5628e91020e4 in _start ../sysdeps/x86_64/start.S:115

    SUMMARY: AddressSanitizer: heap-buffer-overflow /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:827 in __interceptor_memcpy
    Shadow bytes around the buggy address:
      0x0fe458c572a0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0fe458c572b0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0fe458c572c0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0fe458c572d0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0fe458c572e0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
    =>0x0fe458c572f0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa[fa]
      0x0fe458c57300: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
      0x0fe458c57310: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
      0x0fe458c57320: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
      0x0fe458c57330: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
      0x0fe458c57340: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
    Shadow byte legend (one shadow byte represents 8 application bytes):
      Addressable:           00
      Partially addressable: 01 02 03 04 05 06 07
      Heap left redzone:       fa
      Freed heap region:       fd
      Stack left redzone:      f1
      Stack mid redzone:       f2
      Stack right redzone:     f3
      Stack after return:      f5
      Stack use after scope:   f8
      Global redzone:          f9
      Global init order:       f6
      Poisoned by user:        f7
      Container overflow:      fc
      Array cookie:            ac
      Intra object redzone:    bb
      ASan internal:           fe
      Left alloca redzone:     ca
      Right alloca redzone:    cb
    ==8340==ABORTING

The pretty format can also be used in `git archive` operations via the
`export-subst` attribute. So this is what in our opinion makes this a
critical issue in the context of Git forges which allow to download an
archive of user supplied Git repositories.

Fix this vulnerability by using `size_t` instead of `int` to track the
string lengths. Add tests which detect this vulnerability when Git is
compiled with the address sanitizer.

Reported-by: Joern Schneeweisz <jschneeweisz@gitlab.com>
Original-patch-by: Joern Schneeweisz <jschneeweisz@gitlab.com>
Modified-by: Taylor  Blau <me@ttalorr.com>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jan 17, 2023
With the `%>>(<N>)` pretty formatter, you can ask git-log(1) et al to
steal spaces. To do so we need to look ahead of the next token to see
whether there are spaces there. This loop takes into account ANSI
sequences that end with an `m`, and if it finds any it will skip them
until it finds the first space. While doing so it does not take into
account the buffer's limits though and easily does an out-of-bounds
read.

Add a test that hits this behaviour. While we don't have an easy way to
verify this, the test causes the following failure when run with
`SANITIZE=address`:

    ==37941==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x603000000baf at pc 0x55ba6f88e0d0 bp 0x7ffc84c50d20 sp 0x7ffc84c50d10
    READ of size 1 at 0x603000000baf thread T0
        #0 0x55ba6f88e0cf in format_and_pad_commit pretty.c:1712
        #1 0x55ba6f88e7b4 in format_commit_item pretty.c:1801
        #2 0x55ba6f9b1ae4 in strbuf_expand strbuf.c:429
        #3 0x55ba6f88f020 in repo_format_commit_message pretty.c:1869
        #4 0x55ba6f890ccf in pretty_print_commit pretty.c:2161
        #5 0x55ba6f7884c8 in show_log log-tree.c:781
        #6 0x55ba6f78b6ba in log_tree_commit log-tree.c:1117
        #7 0x55ba6f40fed5 in cmd_log_walk_no_free builtin/log.c:508
        #8 0x55ba6f41035b in cmd_log_walk builtin/log.c:549
        #9 0x55ba6f4131a2 in cmd_log builtin/log.c:883
        #10 0x55ba6f2ea993 in run_builtin git.c:466
        #11 0x55ba6f2eb397 in handle_builtin git.c:721
        #12 0x55ba6f2ebb07 in run_argv git.c:788
        #13 0x55ba6f2ec8a7 in cmd_main git.c:923
        #14 0x55ba6f581682 in main common-main.c:57
        #15 0x7f2d08c3c28f  (/usr/lib/libc.so.6+0x2328f)
        #16 0x7f2d08c3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #17 0x55ba6f2e60e4 in _start ../sysdeps/x86_64/start.S:115

    0x603000000baf is located 1 bytes to the left of 24-byte region [0x603000000bb0,0x603000000bc8)
    allocated by thread T0 here:
        #0 0x7f2d08ebe7ea in __interceptor_realloc /usr/src/debug/gcc/libsanitizer/asan/asan_malloc_linux.cpp:85
        #1 0x55ba6fa5b494 in xrealloc wrapper.c:136
        #2 0x55ba6f9aefdc in strbuf_grow strbuf.c:99
        #3 0x55ba6f9b0a06 in strbuf_add strbuf.c:298
        #4 0x55ba6f9b1a25 in strbuf_expand strbuf.c:418
        #5 0x55ba6f88f020 in repo_format_commit_message pretty.c:1869
        #6 0x55ba6f890ccf in pretty_print_commit pretty.c:2161
        #7 0x55ba6f7884c8 in show_log log-tree.c:781
        #8 0x55ba6f78b6ba in log_tree_commit log-tree.c:1117
        #9 0x55ba6f40fed5 in cmd_log_walk_no_free builtin/log.c:508
        #10 0x55ba6f41035b in cmd_log_walk builtin/log.c:549
        #11 0x55ba6f4131a2 in cmd_log builtin/log.c:883
        #12 0x55ba6f2ea993 in run_builtin git.c:466
        #13 0x55ba6f2eb397 in handle_builtin git.c:721
        #14 0x55ba6f2ebb07 in run_argv git.c:788
        #15 0x55ba6f2ec8a7 in cmd_main git.c:923
        #16 0x55ba6f581682 in main common-main.c:57
        #17 0x7f2d08c3c28f  (/usr/lib/libc.so.6+0x2328f)
        #18 0x7f2d08c3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #19 0x55ba6f2e60e4 in _start ../sysdeps/x86_64/start.S:115

    SUMMARY: AddressSanitizer: heap-buffer-overflow pretty.c:1712 in format_and_pad_commit
    Shadow bytes around the buggy address:
      0x0c067fff8120: fa fa fd fd fd fa fa fa fd fd fd fa fa fa fd fd
      0x0c067fff8130: fd fd fa fa fd fd fd fd fa fa fd fd fd fa fa fa
      0x0c067fff8140: fd fd fd fa fa fa fd fd fd fa fa fa fd fd fd fa
      0x0c067fff8150: fa fa fd fd fd fd fa fa 00 00 00 fa fa fa fd fd
      0x0c067fff8160: fd fa fa fa fd fd fd fa fa fa fd fd fd fa fa fa
    =>0x0c067fff8170: fd fd fd fa fa[fa]00 00 00 fa fa fa 00 00 00 fa
      0x0c067fff8180: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff8190: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff81a0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff81b0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff81c0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
    Shadow byte legend (one shadow byte represents 8 application bytes):
      Addressable:           00
      Partially addressable: 01 02 03 04 05 06 07
      Heap left redzone:       fa
      Freed heap region:       fd
      Stack left redzone:      f1
      Stack mid redzone:       f2
      Stack right redzone:     f3
      Stack after return:      f5
      Stack use after scope:   f8
      Global redzone:          f9
      Global init order:       f6
      Poisoned by user:        f7
      Container overflow:      fc
      Array cookie:            ac
      Intra object redzone:    bb
      ASan internal:           fe
      Left alloca redzone:     ca
      Right alloca redzone:    cb

Luckily enough, this would only cause us to copy the out-of-bounds data
into the formatted commit in case we really had an ANSI sequence
preceding our buffer. So this bug likely has no security consequences.

Fix it regardless by not traversing past the buffer's start.

Reported-by: Patrick Steinhardt <ps@pks.im>
Reported-by: Eric Sesterhenn <eric.sesterhenn@x41-dsec.de>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jan 17, 2023
An out-of-bounds read can be triggered when parsing an incomplete
padding format string passed via `--pretty=format` or in Git archives
when files are marked with the `export-subst` gitattribute.

This bug exists since we have introduced support for truncating output
via the `trunc` keyword a7f01c6 (pretty: support truncating in %>, %<
and %><, 2013-04-19). Before this commit, we used to find the end of the
formatting string by using strchr(3P). This function returns a `NULL`
pointer in case the character in question wasn't found. The subsequent
check whether any character was found thus simply checked the returned
pointer. After the commit we switched to strcspn(3P) though, which only
returns the offset to the first found character or to the trailing NUL
byte. As the end pointer is now computed by adding the offset to the
start pointer it won't be `NULL` anymore, and as a consequence the check
doesn't do anything anymore.

The out-of-bounds data that is being read can in fact end up in the
formatted string. As a consequence, it is possible to leak memory
contents either by calling git-log(1) or via git-archive(1) when any of
the archived files is marked with the `export-subst` gitattribute.

    ==10888==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x602000000398 at pc 0x7f0356047cb2 bp 0x7fff3ffb95d0 sp 0x7fff3ffb8d78
    READ of size 1 at 0x602000000398 thread T0
        #0 0x7f0356047cb1 in __interceptor_strchrnul /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:725
        #1 0x563b7cec9a43 in strbuf_expand strbuf.c:417
        #2 0x563b7cda7060 in repo_format_commit_message pretty.c:1869
        #3 0x563b7cda8d0f in pretty_print_commit pretty.c:2161
        #4 0x563b7cca04c8 in show_log log-tree.c:781
        #5 0x563b7cca36ba in log_tree_commit log-tree.c:1117
        #6 0x563b7c927ed5 in cmd_log_walk_no_free builtin/log.c:508
        #7 0x563b7c92835b in cmd_log_walk builtin/log.c:549
        #8 0x563b7c92b1a2 in cmd_log builtin/log.c:883
        #9 0x563b7c802993 in run_builtin git.c:466
        #10 0x563b7c803397 in handle_builtin git.c:721
        #11 0x563b7c803b07 in run_argv git.c:788
        #12 0x563b7c8048a7 in cmd_main git.c:923
        #13 0x563b7ca99682 in main common-main.c:57
        #14 0x7f0355e3c28f  (/usr/lib/libc.so.6+0x2328f)
        #15 0x7f0355e3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #16 0x563b7c7fe0e4 in _start ../sysdeps/x86_64/start.S:115

    0x602000000398 is located 0 bytes to the right of 8-byte region [0x602000000390,0x602000000398)
    allocated by thread T0 here:
        #0 0x7f0356072faa in __interceptor_strdup /usr/src/debug/gcc/libsanitizer/asan/asan_interceptors.cpp:439
        #1 0x563b7cf7317c in xstrdup wrapper.c:39
        #2 0x563b7cd9a06a in save_user_format pretty.c:40
        #3 0x563b7cd9b3e5 in get_commit_format pretty.c:173
        #4 0x563b7ce54ea0 in handle_revision_opt revision.c:2456
        #5 0x563b7ce597c9 in setup_revisions revision.c:2850
        #6 0x563b7c9269e0 in cmd_log_init_finish builtin/log.c:269
        #7 0x563b7c927362 in cmd_log_init builtin/log.c:348
        #8 0x563b7c92b193 in cmd_log builtin/log.c:882
        #9 0x563b7c802993 in run_builtin git.c:466
        #10 0x563b7c803397 in handle_builtin git.c:721
        #11 0x563b7c803b07 in run_argv git.c:788
        #12 0x563b7c8048a7 in cmd_main git.c:923
        #13 0x563b7ca99682 in main common-main.c:57
        #14 0x7f0355e3c28f  (/usr/lib/libc.so.6+0x2328f)
        #15 0x7f0355e3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #16 0x563b7c7fe0e4 in _start ../sysdeps/x86_64/start.S:115

    SUMMARY: AddressSanitizer: heap-buffer-overflow /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:725 in __interceptor_strchrnul
    Shadow bytes around the buggy address:
      0x0c047fff8020: fa fa fd fd fa fa 00 06 fa fa 05 fa fa fa fd fd
      0x0c047fff8030: fa fa 00 02 fa fa 06 fa fa fa 05 fa fa fa fd fd
      0x0c047fff8040: fa fa 00 07 fa fa 03 fa fa fa fd fd fa fa 00 00
      0x0c047fff8050: fa fa 00 01 fa fa fd fd fa fa 00 00 fa fa 00 01
      0x0c047fff8060: fa fa 00 06 fa fa 00 06 fa fa 05 fa fa fa 05 fa
    =>0x0c047fff8070: fa fa 00[fa]fa fa fd fa fa fa fd fd fa fa fd fd
      0x0c047fff8080: fa fa fd fd fa fa 00 00 fa fa 00 fa fa fa fd fa
      0x0c047fff8090: fa fa fd fd fa fa 00 00 fa fa fa fa fa fa fa fa
      0x0c047fff80a0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c047fff80b0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c047fff80c0: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
    Shadow byte legend (one shadow byte represents 8 application bytes):
      Addressable:           00
      Partially addressable: 01 02 03 04 05 06 07
      Heap left redzone:       fa
      Freed heap region:       fd
      Stack left redzone:      f1
      Stack mid redzone:       f2
      Stack right redzone:     f3
      Stack after return:      f5
      Stack use after scope:   f8
      Global redzone:          f9
      Global init order:       f6
      Poisoned by user:        f7
      Container overflow:      fc
      Array cookie:            ac
      Intra object redzone:    bb
      ASan internal:           fe
      Left alloca redzone:     ca
      Right alloca redzone:    cb
    ==10888==ABORTING

Fix this bug by checking whether `end` points at the trailing NUL byte.
Add a test which catches this out-of-bounds read and which demonstrates
that we used to write out-of-bounds data into the formatted message.

Reported-by: Markus Vervier <markus.vervier@x41-dsec.de>
Original-patch-by: Markus Vervier <markus.vervier@x41-dsec.de>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jan 17, 2023
The return type of both `utf8_strwidth()` and `utf8_strnwidth()` is
`int`, but we operate on string lengths which are typically of type
`size_t`. This means that when the string is longer than `INT_MAX`, we
will overflow and thus return a negative result.

This can lead to an out-of-bounds write with `--pretty=format:%<1)%B`
and a commit message that is 2^31+1 bytes long:

    =================================================================
    ==26009==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x603000001168 at pc 0x7f95c4e5f427 bp 0x7ffd8541c900 sp 0x7ffd8541c0a8
    WRITE of size 2147483649 at 0x603000001168 thread T0
        #0 0x7f95c4e5f426 in __interceptor_memcpy /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:827
        #1 0x5612bbb1068c in format_and_pad_commit pretty.c:1763
        #2 0x5612bbb1087a in format_commit_item pretty.c:1801
        #3 0x5612bbc33bab in strbuf_expand strbuf.c:429
        #4 0x5612bbb110e7 in repo_format_commit_message pretty.c:1869
        #5 0x5612bbb12d96 in pretty_print_commit pretty.c:2161
        #6 0x5612bba0a4d5 in show_log log-tree.c:781
        #7 0x5612bba0d6c7 in log_tree_commit log-tree.c:1117
        #8 0x5612bb691ed5 in cmd_log_walk_no_free builtin/log.c:508
        #9 0x5612bb69235b in cmd_log_walk builtin/log.c:549
        #10 0x5612bb6951a2 in cmd_log builtin/log.c:883
        #11 0x5612bb56c993 in run_builtin git.c:466
        #12 0x5612bb56d397 in handle_builtin git.c:721
        #13 0x5612bb56db07 in run_argv git.c:788
        #14 0x5612bb56e8a7 in cmd_main git.c:923
        #15 0x5612bb803682 in main common-main.c:57
        #16 0x7f95c4c3c28f  (/usr/lib/libc.so.6+0x2328f)
        #17 0x7f95c4c3c349 in __libc_start_main (/usr/lib/libc.so.6+0x23349)
        #18 0x5612bb5680e4 in _start ../sysdeps/x86_64/start.S:115

    0x603000001168 is located 0 bytes to the right of 24-byte region [0x603000001150,0x603000001168)
    allocated by thread T0 here:
        #0 0x7f95c4ebe7ea in __interceptor_realloc /usr/src/debug/gcc/libsanitizer/asan/asan_malloc_linux.cpp:85
        #1 0x5612bbcdd556 in xrealloc wrapper.c:136
        #2 0x5612bbc310a3 in strbuf_grow strbuf.c:99
        #3 0x5612bbc32acd in strbuf_add strbuf.c:298
        #4 0x5612bbc33aec in strbuf_expand strbuf.c:418
        #5 0x5612bbb110e7 in repo_format_commit_message pretty.c:1869
        #6 0x5612bbb12d96 in pretty_print_commit pretty.c:2161
        #7 0x5612bba0a4d5 in show_log log-tree.c:781
        #8 0x5612bba0d6c7 in log_tree_commit log-tree.c:1117
        #9 0x5612bb691ed5 in cmd_log_walk_no_free builtin/log.c:508
        #10 0x5612bb69235b in cmd_log_walk builtin/log.c:549
        #11 0x5612bb6951a2 in cmd_log builtin/log.c:883
        #12 0x5612bb56c993 in run_builtin git.c:466
        #13 0x5612bb56d397 in handle_builtin git.c:721
        #14 0x5612bb56db07 in run_argv git.c:788
        #15 0x5612bb56e8a7 in cmd_main git.c:923
        #16 0x5612bb803682 in main common-main.c:57
        #17 0x7f95c4c3c28f  (/usr/lib/libc.so.6+0x2328f)

    SUMMARY: AddressSanitizer: heap-buffer-overflow /usr/src/debug/gcc/libsanitizer/sanitizer_common/sanitizer_common_interceptors.inc:827 in __interceptor_memcpy
    Shadow bytes around the buggy address:
      0x0c067fff81d0: fd fd fd fa fa fa fd fd fd fa fa fa fd fd fd fa
      0x0c067fff81e0: fa fa fd fd fd fd fa fa fd fd fd fd fa fa fd fd
      0x0c067fff81f0: fd fa fa fa fd fd fd fa fa fa fd fd fd fa fa fa
      0x0c067fff8200: fd fd fd fa fa fa fd fd fd fd fa fa 00 00 00 fa
      0x0c067fff8210: fa fa fd fd fd fa fa fa fd fd fd fa fa fa fd fd
    =>0x0c067fff8220: fd fa fa fa fd fd fd fa fa fa 00 00 00[fa]fa fa
      0x0c067fff8230: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff8240: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff8250: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff8260: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
      0x0c067fff8270: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
    Shadow byte legend (one shadow byte represents 8 application bytes):
      Addressable:           00
      Partially addressable: 01 02 03 04 05 06 07
      Heap left redzone:       fa
      Freed heap region:       fd
      Stack left redzone:      f1
      Stack mid redzone:       f2
      Stack right redzone:     f3
      Stack after return:      f5
      Stack use after scope:   f8
      Global redzone:          f9
      Global init order:       f6
      Poisoned by user:        f7
      Container overflow:      fc
      Array cookie:            ac
      Intra object redzone:    bb
      ASan internal:           fe
      Left alloca redzone:     ca
      Right alloca redzone:    cb
    ==26009==ABORTING

Now the proper fix for this would be to convert both functions to return
an `size_t` instead of an `int`. But given that this commit may be part
of a security release, let's instead do the minimal viable fix and die
in case we see an overflow.

Add a test that would have previously caused us to crash.

Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Sep 27, 2023
When t5583-push-branches.sh was originally introduced via 425b4d7
(push: introduce '--branches' option, 2023-05-06), it was not leak-free.
In fact, the test did not even run correctly until 022fbb6 (t5583:
fix shebang line, 2023-05-12), but after applying that patch, we see a
failure at t5583.8:

    ==2529087==ERROR: LeakSanitizer: detected memory leaks

    Direct leak of 384 byte(s) in 1 object(s) allocated from:
        #0 0x7fb536330986 in __interceptor_realloc ../../../../src/libsanitizer/lsan/lsan_interceptors.cpp:98
        #1 0x55e07606cbf9 in xrealloc wrapper.c:140
        #2 0x55e075fb6cb3 in prio_queue_put prio-queue.c:42
        #3 0x55e075ec81cb in get_reachable_subset commit-reach.c:917
        #4 0x55e075fe9cce in add_missing_tags remote.c:1518
        #5 0x55e075fea1e4 in match_push_refs remote.c:1665
        #6 0x55e076050a8e in transport_push transport.c:1378
        #7 0x55e075e2eb74 in push_with_options builtin/push.c:401
        #8 0x55e075e2edb0 in do_push builtin/push.c:458
        #9 0x55e075e2ff7a in cmd_push builtin/push.c:702
        #10 0x55e075d8aaf0 in run_builtin git.c:452
        #11 0x55e075d8af08 in handle_builtin git.c:706
        #12 0x55e075d8b12c in run_argv git.c:770
        #13 0x55e075d8b6a0 in cmd_main git.c:905
        #14 0x55e075e81f07 in main common-main.c:60
        #15 0x7fb5360ab6c9 in __libc_start_call_main ../sysdeps/nptl/libc_start_call_main.h:58
        #16 0x7fb5360ab784 in __libc_start_main_impl ../csu/libc-start.c:360
        #17 0x55e075d88f40 in _start (git+0x1ff40) (BuildId: 38ad998b85a535e786129979443630d025ec2453)

    SUMMARY: LeakSanitizer: 384 byte(s) leaked in 1 allocation(s).

This leak was addressed independently via 68b5117 (commit-reach: fix
memory leak in get_reachable_subset(), 2023-06-03), which makes t5583
leak-free.

But t5583 was not in the tree when 68b5117 was written, and the two
only met after the latter was merged back in via 693bde4 (Merge
branch 'mh/commit-reach-get-reachable-plug-leak', 2023-06-20).

At that point, t5583 was leak-free. Let's mark it as such accordingly.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Acked-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Apr 4, 2024
When "update-index --unresolve $path" cannot find the resolve-undo
record for the path the user requested to unresolve, it stuffs the
blobs from HEAD and MERGE_HEAD to stage #2 and stage #3 as a
fallback.  For this reason, the operation does not even start unless
both "HEAD" and "MERGE_HEAD" exist.

This is suboptimal in a few ways:

 * It does not recreate stage #1.  Even though it is a correct
   design decision not to do so (because it is impossible to
   recreate in general cases, without knowing how we got there,
   including what merge strategy was used), it is much less useful
   not to have that information in the index.

 * It limits the "unresolve" operation only during a conflicted "git
   merge" and nothing else.  Other operations like "rebase",
   "cherry-pick", and "switch -m" may result in conflicts, and the
   user may want to unresolve the conflict that they incorrectly
   resolved in order to redo the resolution, but the fallback would
   not kick in.

 * Most importantly, the entire "unresolve" operation is disabled
   after a conflicted merge is committed and MERGE_HEAD is removed,
   even though the index has perfectly usable resolve-undo records.

By lazily reading the HEAD and MERGE_HEAD only when we need to go to
the fallback codepath, we will allow cases where resolve-undo
records are available (which is 100% of the time, unless the user is
reading from an index file created by Git more than 10 years ago) to
proceed even after a conflicted merge was committed, during other
mergy operations that do not use MERGE_HEAD, or after the result of
such mergy operations has been committed.

Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Apr 4, 2024
It is tempting to think of "files and directories" of the current
directory as valid inputs to the add and set subcommands of git
sparse-checkout.  However, in non-cone mode, they often aren't and using
them as potential completions leads to *many* forms of confusion:

Issue #1. It provides the *wrong* files and directories.

For
    git sparse-checkout add
we always want to add files and directories not currently in our sparse
checkout, which means we want file and directories not currently present
in the current working tree.  Providing the files and directories
currently present is thus always wrong.

For
    git sparse-checkout set
we have a similar problem except in the subset of cases where we are
trying to narrow our checkout to a strict subset of what we already
have.  That is not a very common scenario, especially since it often
does not even happen to be true for the first use of the command; for
years we required users to create a sparse-checkout via
    git sparse-checkout init
    git sparse-checkout set <args...>
(or use a clone option that did the init step for you at clone time).
The init command creates a minimal sparse-checkout with just the
top-level directory present, meaning the set command has to be used to
expand the checkout.  Thus, only in a special and perhaps unusual cases
would any of the suggestions from normal file and directory completion
be appropriate.

Issue #2: Suggesting patterns that lead to warnings is unfriendly.

If the user specifies any regular file and omits the leading '/', then
the sparse-checkout command will warn the user that their command is
problematic and suggest they use a leading slash instead.

Issue #3: Completion gets confused by leading '/', and provides wrong paths.

Users often want to anchor their patterns to the toplevel of the
repository, especially when listing individual files.  There are a
number of reasons for this, but notably even sparse-checkout encourages
them to do so (as noted above).  However, if users do so (via adding a
leading '/' to their pattern), then bash completion will interpret the
leading slash not as a request for a path at the toplevel of the
repository, but as a request for a path at the root of the filesytem.
That means at best that completion cannot help with such paths, and if
it does find any completions, they are almost guaranteed to be wrong.

Issue #4: Suggesting invalid patterns from subdirectories is unfriendly.

There is no per-directory equivalent to .gitignore with
sparse-checkouts.  There is only a single worktree-global
$GIT_DIR/info/sparse-checkout file.  As such, paths to files must be
specified relative to the toplevel of a repository.  Providing
suggestions of paths that are relative to the current working directory,
as bash completion defaults to, is wrong when the current working
directory is not the worktree toplevel directory.

Issue #5: Paths with special characters will be interpreted incorrectly

The entries in the sparse-checkout file are patterns, not paths.  While
most paths also qualify as patterns (though even in such cases it would
be better for users to not use them directly but prefix them with a
leading '/'), there are a variety of special characters that would need
special escaping beyond the normal shell escaping: '*', '?', '\', '[',
']', and any leading '#' or '!'.  If completion suggests any such paths,
users will likely expect them to be treated as an exact path rather than
as a pattern that might match some number of files other than 1.

However, despite the first four issues, we can note that _if_ users are
using tab completion, then they are probably trying to specify a path in
the index.  As such, we transform their argument into a top-level-rooted
pattern that matches such a file.  For example, if they type:
   git sparse-checkout add Make<TAB>
we could "complete" to
   git sparse-checkout add /Makefile
or, if they ran from the Documentation/technical/ subdirectory:
   git sparse-checkout add m<TAB>
we could "complete" it to:
   git sparse-checkout add /Documentation/technical/multi-pack-index.txt
Note in both cases I use "complete" in quotes, because we actually add
characters both before and after the argument in question, so we are
kind of abusing "bash completions" to be "bash completions AND
beginnings".

The fifth issue is a bit stickier, especially when you consider that we
not only need to deal with escaping issues because of special meanings
of patterns in sparse-checkout & gitignore files, but also that we need
to consider escaping issues due to ls-files needing to sometimes quote
or escape characters, and because the shell needs to escape some
characters.  The multiple interacting forms of escaping could get ugly;
this patch makes no attempt to do so and simply documents that we
decided to not deal with those corner cases for now but at least get the
common cases right.

Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Apr 4, 2024
The t5309 script triggers a racy false positive with SANITIZE=leak on a
multi-core system. Running with "--stress --run=6" usually fails within
10 seconds or so for me, complaining with something like:

    + git index-pack --fix-thin --stdin
    fatal: REF_DELTA at offset 46 already resolved (duplicate base 01d7713666f4de822776c7622c10f1b07de280dc?)

    =================================================================
    ==3904583==ERROR: LeakSanitizer: detected memory leaks

    Direct leak of 32 byte(s) in 1 object(s) allocated from:
        #0 0x7fa790d01986 in __interceptor_realloc ../../../../src/libsanitizer/lsan/lsan_interceptors.cpp:98
        #1 0x7fa790add769 in __pthread_getattr_np nptl/pthread_getattr_np.c:180
        #2 0x7fa790d117c5 in __sanitizer::GetThreadStackTopAndBottom(bool, unsigned long*, unsigned long*) ../../../../src/libsanitizer/sanitizer_common/sanitizer_linux_libcdep.cpp:150
        #3 0x7fa790d11957 in __sanitizer::GetThreadStackAndTls(bool, unsigned long*, unsigned long*, unsigned long*, unsigned long*) ../../../../src/libsanitizer/sanitizer_common/sanitizer_linux_libcdep.cpp:598
        #4 0x7fa790d03fe8 in __lsan::ThreadStart(unsigned int, unsigned long long, __sanitizer::ThreadType) ../../../../src/libsanitizer/lsan/lsan_posix.cpp:51
        #5 0x7fa790d013fd in __lsan_thread_start_func ../../../../src/libsanitizer/lsan/lsan_interceptors.cpp:440
        #6 0x7fa790adc3eb in start_thread nptl/pthread_create.c:444
        #7 0x7fa790b5ca5b in clone3 ../sysdeps/unix/sysv/linux/x86_64/clone3.S:81

    SUMMARY: LeakSanitizer: 32 byte(s) leaked in 1 allocation(s).
    Aborted

What happens is this:

  0. We construct a bogus pack with a duplicate object in it and trigger
     index-pack.

  1. We spawn a bunch of worker threads to resolve deltas (on my system
     it is 16 threads).

  2. One of the threads sees the duplicate object and bails by calling
     exit(), taking down all of the threads. This is expected and is the
     point of the test.

  3. At the time exit() is called, we may still be spawning threads from
     the main process via pthread_create(). LSan hooks thread creation
     to update its book-keeping; it has to know where each thread's
     stack is (so it can find entry points for reachable memory). So it
     calls pthread_getattr_np() to get information about the new thread.
     That may allocate memory that must be freed with a matching call to
     pthread_attr_destroy(). Probably LSan does that immediately, but
     if you're unlucky enough, the exit() will happen while it's between
     those two calls, and the allocated pthread_attr_t appears as a
     leak.

This isn't a real leak. It's not even in our code, but rather in the
LSan instrumentation code. So we could just ignore it. But the false
positive can cause people to waste time tracking it down.

It's possibly something that LSan could protect against (e.g., cover the
getattr/destroy pair with a mutex, and then in the final post-exit()
check for leaks try to take the same mutex). But I don't know enough
about LSan to say if that's a reasonable approach or not (or if my
analysis is even completely correct).

In the meantime, it's pretty easy to avoid the race by making creation
of the worker threads "atomic". That is, we'll spawn all of them before
letting any of them start to work. That's easy to do because we already
have a work_lock() mutex for handing out that work. If the main process
takes it, then all of the threads will immediately block until we've
finished spawning and released it.

This shouldn't make any practical difference for non-LSan runs. The
thread spawning is quick, and could happen before any worker thread gets
scheduled anyway.

Probably other spots that use threads are subject to the same issues.
But since we have to manually insert locking (and since this really is
kind of a hack), let's not bother with them unless somebody experiences
a similar racy false-positive in practice.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jul 3, 2024
When performing multi-pack reuse, reuse_partial_packfile_from_bitmap()
is responsible for generating an array of bitmapped_pack structs from
which to perform reuse.

In the multi-pack case, we loop over the MIDXs packs and copy the result
of calling `nth_bitmapped_pack()` to construct the list of reusable
paths.

But we may also want to do pack-reuse over a single pack, either because
we only had one pack to perform reuse over (in the case of single-pack
bitmaps), or because we explicitly asked to do single pack reuse even
with a MIDX[^1].

When this is the case, the array we generate of reusable packs contains
only a single element, which is either (a) the pack attached to the
single-pack bitmap, or (b) the MIDX's preferred pack.

In 795006f (pack-bitmap: gracefully handle missing BTMP chunks,
2024-04-15), we refactored the reuse_partial_packfile_from_bitmap()
function and stopped assigning the pack_int_id field when reusing only
the MIDX's preferred pack. This results in an uninitialized read down in
try_partial_reuse() like so:

    ==7474==WARNING: MemorySanitizer: use-of-uninitialized-value
    #0 0x55c5cd191dde in try_partial_reuse pack-bitmap.c:1887:8
    #1 0x55c5cd191dde in reuse_partial_packfile_from_bitmap_1 pack-bitmap.c:2001:8
    #2 0x55c5cd191dde in reuse_partial_packfile_from_bitmap pack-bitmap.c:2105:3
    #3 0x55c5cce0bd0e in get_object_list_from_bitmap builtin/pack-objects.c:4043:3
    #4 0x55c5cce0bd0e in get_object_list builtin/pack-objects.c:4156:27
    #5 0x55c5cce0bd0e in cmd_pack_objects builtin/pack-objects.c:4596:3
    #6 0x55c5ccc8fac8 in run_builtin git.c:474:11

which happens when try_partial_reuse() tries to call
midx_pair_to_pack_pos() when it tries to reject cross-pack deltas.

Avoid the uninitialized read by ensuring that the pack_int_id field is
set in the single-pack reuse case by setting it to either the MIDX
preferred pack's pack_int_id, or '-1', in the case of single-pack
bitmaps.  In the latter case, we never read the pack_int_id field, so
the choice of '-1' is intentional as a "garbage in, garbage out"
measure.

Guard against further regressions in this area by adding a test which
ensures that we do not throw out deltas from the preferred pack as
"cross-pack" due to an uninitialized pack_int_id.

[^1]: This can happen for a couple of reasons, either because the
  repository is configured with 'pack.allowPackReuse=(true|single)', or
  because the MIDX was generated prior to the introduction of the BTMP
  chunk, which contains information necessary to perform multi-pack
  reuse.

Reported-by: Kyle Lippincott <spectral@google.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Jul 3, 2024
Memory sanitizer (msan) is detecting a use of an uninitialized variable
(`size`) in `read_attr_from_index`:

    ==2268==WARNING: MemorySanitizer: use-of-uninitialized-value
    #0 0x5651f3416504 in read_attr_from_index git/attr.c:868:11
    #1 0x5651f3415530 in read_attr git/attr.c
    #2 0x5651f3413d74 in bootstrap_attr_stack git/attr.c:968:6
    #3 0x5651f3413d74 in prepare_attr_stack git/attr.c:1004:2
    #4 0x5651f3413d74 in collect_some_attrs git/attr.c:1199:2
    #5 0x5651f3413144 in git_check_attr git/attr.c:1345:2
    #6 0x5651f34728da in convert_attrs git/convert.c:1320:2
    #7 0x5651f3473425 in would_convert_to_git_filter_fd git/convert.c:1373:2
    #8 0x5651f357a35e in index_fd git/object-file.c:2630:34
    #9 0x5651f357aa15 in index_path git/object-file.c:2657:7
    #10 0x5651f35db9d9 in add_to_index git/read-cache.c:766:7
    #11 0x5651f35dc170 in add_file_to_index git/read-cache.c:799:9
    #12 0x5651f321f9b2 in add_files git/builtin/add.c:346:7
    #13 0x5651f321f9b2 in cmd_add git/builtin/add.c:565:18
    #14 0x5651f321d327 in run_builtin git/git.c:474:11
    #15 0x5651f321bc9e in handle_builtin git/git.c:729:3
    #16 0x5651f321a792 in run_argv git/git.c:793:4
    #17 0x5651f321a792 in cmd_main git/git.c:928:19
    #18 0x5651f33dde1f in main git/common-main.c:62:11

The issue exists because `size` is an output parameter from
`read_blob_data_from_index`, but it's only modified if
`read_blob_data_from_index` returns non-NULL. The read of `size` when
calling `read_attr_from_buf` unconditionally may read from an
uninitialized value. `read_attr_from_buf` checks that `buf` is non-NULL
before reading from `size`, but by then it's already too late: the
uninitialized read will have happened already. Furthermore, there's no
guarantee that the compiler won't reorder things so that it checks
`size` before checking `!buf`.

Make the call to `read_attr_from_buf` conditional on `buf` being
non-NULL, ensuring that `size` is not read if it's never set.

Signed-off-by: Kyle Lippincott <spectral@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Aug 12, 2024
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Sep 5, 2024
It was recently reported that concurrent reads and writes may cause the
reftable backend to segfault. The root cause of this is that we do not
properly keep track of reftable readers across reloads.

Suppose that you have a reftable iterator and then decide to reload the
stack while iterating through the iterator. When the stack has been
rewritten since we have created the iterator, then we would end up
discarding a subset of readers that may still be in use by the iterator.
The consequence is that we now try to reference deallocated memory,
which of course segfaults.

One way to trigger this is in t5616, where some background maintenance
jobs have been leaking from one test into another. This leads to stack
traces like the following one:

  + git -c protocol.version=0 -C pc1 fetch --filter=blob:limit=29999 --refetch origin
  AddressSanitizer:DEADLYSIGNAL
  =================================================================
  ==657994==ERROR: AddressSanitizer: SEGV on unknown address 0x7fa0f0ec6089 (pc 0x55f23e52ddf9 bp
0x7ffe7bfa1700 sp 0x7ffe7bfa1700 T0)
  ==657994==The signal is caused by a READ memory access.
      #0 0x55f23e52ddf9 in get_var_int reftable/record.c:29
      #1 0x55f23e53295e in reftable_decode_keylen reftable/record.c:170
      #2 0x55f23e532cc0 in reftable_decode_key reftable/record.c:194
      #3 0x55f23e54e72e in block_iter_next reftable/block.c:398
      #4 0x55f23e5573dc in table_iter_next_in_block reftable/reader.c:240
      #5 0x55f23e5573dc in table_iter_next reftable/reader.c:355
      #6 0x55f23e5573dc in table_iter_next reftable/reader.c:339
      #7 0x55f23e551283 in merged_iter_advance_subiter reftable/merged.c:69
      #8 0x55f23e55169e in merged_iter_next_entry reftable/merged.c:123
      #9 0x55f23e55169e in merged_iter_next_void reftable/merged.c:172
      #10 0x55f23e537625 in reftable_iterator_next_ref reftable/generic.c:175
      #11 0x55f23e2cf9c6 in reftable_ref_iterator_advance refs/reftable-backend.c:464
      #12 0x55f23e2d996e in ref_iterator_advance refs/iterator.c:13
      #13 0x55f23e2d996e in do_for_each_ref_iterator refs/iterator.c:452
      #14 0x55f23dca6767 in get_ref_map builtin/fetch.c:623
      #15 0x55f23dca6767 in do_fetch builtin/fetch.c:1659
      #16 0x55f23dca6767 in fetch_one builtin/fetch.c:2133
      #17 0x55f23dca6767 in cmd_fetch builtin/fetch.c:2432
      #18 0x55f23dba7764 in run_builtin git.c:484
      #19 0x55f23dba7764 in handle_builtin git.c:741
      #20 0x55f23dbab61e in run_argv git.c:805
      #21 0x55f23dbab61e in cmd_main git.c:1000
      #22 0x55f23dba4781 in main common-main.c:64
      #23 0x7fa0f063fc89 in __libc_start_call_main ../sysdeps/nptl/libc_start_call_main.h:58
      #24 0x7fa0f063fd44 in __libc_start_main_impl ../csu/libc-start.c:360
      #25 0x55f23dba6ad0 in _start (git+0xadfad0) (BuildId: 803b2b7f59beb03d7849fb8294a8e2145dd4aa27)

While it is somewhat awkward that the maintenance processes survive
tests in the first place, it is totally expected that reftables should
work alright with concurrent writers. Seemingly they don't.

The only underlying resource that we need to care about in this context
is the reftable reader, which is responsible for reading a single table
from disk. These readers get discarded immediately (unless reused) when
calling `reftable_stack_reload()`, which is wrong. We can only close
them once we know that there are no iterators using them anymore.

Prepare for a fix by converting the reftable readers to be refcounted.

Reported-by: Jeff King <peff@peff.net>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
derrickstolee pushed a commit that referenced this pull request Oct 9, 2024
An internal customer reported a segfault when running `git
sparse-checkout set` with the `index.sparse` config enabled. I was
unable to reproduce it locally, but with their help we debugged into the
failing process and discovered the following stacktrace:

```
#0  0x00007ff6318fb7b0 in rehash (map=0x3dfb00d0440, newsize=1048576) at hashmap.c:125
#1  0x00007ff6318fbc66 in hashmap_add (map=0x3dfb00d0440, entry=0x3dfb5c58bc8) at hashmap.c:247
#2  0x00007ff631937a70 in hash_index_entry (istate=0x3dfb00d0400, ce=0x3dfb5c58bc8) at name-hash.c:122
#3  0x00007ff631938a2f in add_name_hash (istate=0x3dfb00d0400, ce=0x3dfb5c58bc8) at name-hash.c:638
#4  0x00007ff631a064de in set_index_entry (istate=0x3dfb00d0400, nr=8291, ce=0x3dfb5c58bc8) at sparse-index.c:255
#5  0x00007ff631a06692 in add_path_to_index (oid=0x5ff130, base=0x5ff580, path=0x3dfb4b725da "<redacted>", mode=33188, context=0x5ff570)    at sparse-index.c:307
#6  0x00007ff631a3b48c in read_tree_at (r=0x7ff631c026a0 <the_repo>, tree=0x3dfb5b41f60, base=0x5ff580, depth=2, pathspec=0x5ff5a0,    fn=0x7ff631a064e5 <add_path_to_index>, context=0x5ff570) at tree.c:46
#7  0x00007ff631a3b60b in read_tree_at (r=0x7ff631c026a0 <the_repo>, tree=0x3dfb5b41e80, base=0x5ff580, depth=1, pathspec=0x5ff5a0,    fn=0x7ff631a064e5 <add_path_to_index>, context=0x5ff570) at tree.c:80
#8  0x00007ff631a3b60b in read_tree_at (r=0x7ff631c026a0 <the_repo>, tree=0x3dfb5b41ac8, base=0x5ff580, depth=0, pathspec=0x5ff5a0,    fn=0x7ff631a064e5 <add_path_to_index>, context=0x5ff570) at tree.c:80
#9  0x00007ff631a06a95 in expand_index (istate=0x3dfb00d0100, pl=0x0) at sparse-index.c:422
#10 0x00007ff631a06cbd in ensure_full_index (istate=0x3dfb00d0100) at sparse-index.c:456
#11 0x00007ff631990d08 in index_name_stage_pos (istate=0x3dfb00d0100, name=0x3dfb0020080 "algorithm/levenshtein", namelen=21, stage=0,    search_mode=EXPAND_SPARSE) at read-cache.c:556
#12 0x00007ff631990d6c in index_name_pos (istate=0x3dfb00d0100, name=0x3dfb0020080 "algorithm/levenshtein", namelen=21) at read-cache.c:566
#13 0x00007ff63180dbb5 in sanitize_paths (argc=185, argv=0x3dfb0030018, prefix=0x0, skip_checks=0) at builtin/sparse-checkout.c:756
#14 0x00007ff63180de50 in sparse_checkout_set (argc=185, argv=0x3dfb0030018, prefix=0x0) at builtin/sparse-checkout.c:860
#15 0x00007ff63180e6c5 in cmd_sparse_checkout (argc=186, argv=0x3dfb0030018, prefix=0x0) at builtin/sparse-checkout.c:1063
#16 0x00007ff6317234cb in run_builtin (p=0x7ff631ad9b38 <commands+2808>, argc=187, argv=0x3dfb0030018) at git.c:548
#17 0x00007ff6317239c0 in handle_builtin (argc=187, argv=0x3dfb0030018) at git.c:808
#18 0x00007ff631723c7d in run_argv (argcp=0x5ffdd0, argv=0x5ffd78) at git.c:877
#19 0x00007ff6317241d1 in cmd_main (argc=187, argv=0x3dfb0030018) at git.c:1017
#20 0x00007ff631838b60 in main (argc=190, argv=0x3dfb0030000) at common-main.c:64 
```

The very bottom of the stack being the `rehash()` method from
`hashmap.c` as called within the `name-hash` API made me look at where
these hashmaps were being used in the sparse index logic. These were
being copied across indexes, which seems dangerous. Indeed, clearing
these hashmaps and setting them as not initialized fixes the segfault.

The second commit is a response to a test failure that happens in
`t1092-sparse-checkout-compatibility.sh` where `git stash pop` starts to
fail because the underlying `git checkout-index` process fails due to
colliding files. Passing the `-f` flag appears to work, but it's unclear
why this name-hash change causes that change in behavior.
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