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Convert {epireview} data into <epidist>
#298
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joshwlambert
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May 16, 2024
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This PR addresses #264 and adds a work-in-progress feature to convert between entries in the {epireview} R package epidemiological parameter tables to
<epidist>
objects for use in pipelines. Theas_epidist()
S3 generic is added to the package, with anas_epidist.data.frame()
method for converting from {epireview}.This feature is not fully tested or documented, but is being merged into
main
to be tested in the WHO EpiParameter workshop for user testing. A future PR will ensure the coercion functions are robust and tested to a more diverse range of input.A new data object
epireview_core_cols
is added to the package to identify which<data.frame>
s are from {epireview}. Thedata-raw
script is also added to the package.This PR adds a vignette that describes the
as_epidist()
methods with various use cases.The existing coercion methods
as.function.epidist()
andas.data.frame.epidist()
are moved to the newcoercion.R
file.