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Update documentation for manual lesion creation #25

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merged 4 commits into from
Mar 2, 2023

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jcohenadad
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@jcohenadad jcohenadad commented Feb 14, 2023

TODO:

TODO: 
- Merge working PR in https://github.com/spinalcordtoolbox/manual-correction, create release and link release in README
- Create hyperlink to section "3. Manual correction of spinal cord segmentation" under "Manual lesion segmentation"
- Make it possible to run the manual lesion segmentation script without existing lesion mask, see spinalcordtoolbox/manual-correction#4
- JSON files updated despite no manual correction spinalcordtoolbox/manual-correction#7
@valosekj
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I am in favor of centralizing all manual_corection.py examples under manual_correction/wiki. I started with this; see https://github.com/spinalcordtoolbox/manual-correction/wiki#ms-lesion-segmentation

mchen1110 and others added 2 commits February 17, 2023 16:17
Added link to dropbox videos reviewing correction of manual lesion segmentations
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valosekj commented Mar 2, 2023

All items listed in #25 (comment) have been addressed. Thanks all for your collaboration. 👍🏻 Merging.

@valosekj valosekj merged commit dc33f94 into main Mar 2, 2023
@valosekj valosekj deleted the jca/update-lesion-seg-procedure branch March 2, 2023 19:49
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4 participants