Skip to content

@MASILab MASI Lab @ Vanderbilt

Change the repository type filter

All

    Repositories list

    143 repositories

    • ADSP_AutoQA

      Public
      Automated QA for ADSP processing
      Python
      •
      MIT License
      •1•1•0•0•Updated Nov 25, 2024Nov 25, 2024

    • lcancer_baselines

      Public
      Python
      •0•0•0•0•Updated Nov 23, 2024Nov 23, 2024

    • pyPheWAS-phecodex

      Public
      MASI Lab Implementation of PheWAS in Python, with phecodex
      Python
      •
      MIT License
      •4•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • pyPheWAS

      Public
      MASI Lab Implementation of PheWAS in Python
      Python
      •
      MIT License
      •4•27•0•0•Updated Nov 12, 2024Nov 12, 2024

    • BRAID

      Public
      BRain Age Identification from Diffusion MRI (BRAID)
      computer-visiondeep-learningmri
      Python
      •
      Other
      •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

    • NerfOrganRecon

      Public
      How to run code to reconstuct an organ surface from an .mp4 video
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • ES-1400

      Public
      Python
      •0•1•0•0•Updated Sep 18, 2024Sep 18, 2024

    • dss_fmri_atlas

      Public
      Diffusion-informed spatial smoothing fMRI atlas
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

    • influence_of_fusion_on_pancreas_segmentation

      Public
      Python
      •0•0•0•0•Updated Sep 3, 2024Sep 3, 2024

    • Informatics_ADSP

      Public
      Shell
      •
      MIT License
      •0•0•0•0•Updated Aug 29, 2024Aug 29, 2024

    • AtlasToDiffusionReg

      Public
      singularity to register an atlas to the diffusion space of a subject
      Jupyter Notebook
      •0•1•0•0•Updated Aug 28, 2024Aug 28, 2024

    • nucleus_and_cell_classification_on_he

      Public
      Classify nuclei/cells on intestinal H&E into 14 different classes
      Jupyter Notebook
      •0•0•0•0•Updated Aug 18, 2024Aug 18, 2024

    • MxIF_Registration

      Public
      Python
      •0•1•0•0•Updated Aug 16, 2024Aug 16, 2024

    • Decathlon_wo_Doctorate

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 6, 2024Aug 6, 2024

    • PreQual

      Public
      An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
      qualitymriassurancepreprocessingdiffusion
      Python
      •
      Other
      •8•45•0•1•Updated Aug 2, 2024Aug 2, 2024

    • UNesT

      Public
      The official Pytorch implementation of UNesT
      Python
      •
      MIT License
      •5•22•0•0•Updated Aug 1, 2024Aug 1, 2024

    • vss_fmri

      Public
      Vasculature-informed spatial smoothing for fMRI
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 30, 2024Jul 30, 2024

    • michael_kim_overview

      Public
      Overview of all projects by Michael Kim (kimm58)
      0•0•0•0•Updated Jul 29, 2024Jul 29, 2024

    • Variance-Aging-Diffusion

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 23, 2024Jul 23, 2024

    • Synb0-DISCO

      Public
      Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
      distortion-correctiondiffusion-mrideep-learning
      Python
      •29•60•0•1•Updated Jul 19, 2024Jul 19, 2024

    • ChatRTX

      Public
      A developer reference project for creating Retrieval Augmented Generation (RAG) chatbots on Windows using TensorRT-LLM
      Python
      •
      Other
      •346•0•0•0•Updated Jul 10, 2024Jul 10, 2024

    • DAPI_RegNet

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jun 21, 2024Jun 21, 2024

    • hovernets_on_vhe

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated May 15, 2024May 15, 2024

    • he_stain_translation_cyclegan

      Public
      Python
      •0•0•0•0•Updated May 14, 2024May 14, 2024

    • nnUNet_midl_2024

      Public
      add custom models
      Python
      •
      Apache License 2.0
      •1.8k•0•0•0•Updated Apr 30, 2024Apr 30, 2024

    • DeepN4

      Public
      Jupyter Notebook
      •1•2•0•0•Updated Mar 12, 2024Mar 12, 2024

    • S-EFOV

      Public
      S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOV
      Other
      •2•13•0•0•Updated Feb 29, 2024Feb 29, 2024

    • WM_fMRI_atlas_Yang

      Public
      0•0•0•0•Updated Feb 20, 2024Feb 20, 2024

    • SynBOLD-DisCo

      Public
      Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
      deep-learningdistortion-correctionfmribold
      Python
      •4•18•0•0•Updated Feb 12, 2024Feb 12, 2024

    • DeepLungScreening

      Public
      Python
      •0•3•0•0•Updated Feb 11, 2024Feb 11, 2024