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add affinity to pump/drainer #741

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Aug 9, 2019
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8 changes: 8 additions & 0 deletions charts/tidb-cluster/templates/drainer-statefulset.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,14 @@ spec:
app.kubernetes.io/managed-by: tidb-operator
app.kubernetes.io/component: drainer
spec:
{{- if .Values.binlog.drainer.affinity }}
affinity:
{{ toYaml .Values.binlog.drainer.affinity | indent 8 }}
{{- end }}
{{- if .Values.binlog.drainer.tolerations }}
tolerations:
{{ toYaml .Values.binlog.drainer.tolerations | indent 8 }}
{{- end }}
containers:
- name: drainer
image: {{ .Values.binlog.drainer.image }}
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8 changes: 8 additions & 0 deletions charts/tidb-cluster/templates/pump-statefulset.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,14 @@ spec:
app.kubernetes.io/managed-by: tidb-operator
app.kubernetes.io/component: pump
spec:
{{- if .Values.binlog.pump.affinity }}
affinity:
{{ toYaml .Values.binlog.pump.affinity | indent 8 }}
{{- end }}
{{- if .Values.binlog.pump.tolerations }}
tolerations:
{{ toYaml .Values.binlog.pump.tolerations | indent 8 }}
{{- end }}
containers:
- name: pump
image: {{ .Values.binlog.pump.image }}
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12 changes: 12 additions & 0 deletions charts/tidb-cluster/values.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -410,6 +410,12 @@ binlog:
# refer to https://kubernetes.io/docs/concepts/storage/storage-classes
storageClassName: local-storage
storage: 20Gi
# affinity for pump pod assignment, default: empty
# ref: https://kubernetes.io/docs/concepts/configuration/assign-pod-node/#affinity-and-anti-affinity
affinity: {}
# tolerations are applied to pods, and allow pods to schedule onto nodes with matching taints.
# refer to https://kubernetes.io/docs/concepts/configuration/taint-and-toleration
tolerations: []
syncLog: true
# a integer value to control expiry date of the binlog data, indicates for how long (in days) the binlog data would be stored.
# must bigger than 0
Expand All @@ -428,6 +434,12 @@ binlog:
# refer to https://kubernetes.io/docs/concepts/storage/storage-classes
storageClassName: local-storage
storage: 10Gi
# affinity for drainer pod assignment, default: empty
# ref: https://kubernetes.io/docs/concepts/configuration/assign-pod-node/#affinity-and-anti-affinity
affinity: {}
# tolerations are applied to pods, and allow pods to schedule onto nodes with matching taints.
# refer to https://kubernetes.io/docs/concepts/configuration/taint-and-toleration
tolerations: []
# the number of the concurrency of the downstream for synchronization. The bigger the value,
# the better throughput performance of the concurrency (16 by default)
workerCount: 16
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49 changes: 44 additions & 5 deletions tests/actions.go
Original file line number Diff line number Diff line change
Expand Up @@ -2333,7 +2333,11 @@ func (oa *operatorActions) CheckIncrementalBackup(info *TidbClusterConfig, withD

listOps := metav1.ListOptions{
LabelSelector: labels.SelectorFromSet(
pumpStatefulSet.Labels,
map[string]string{
label.ComponentLabelKey: "pump",
label.InstanceLabelKey: pumpStatefulSet.Labels[label.InstanceLabelKey],
label.NameLabelKey: "tidb-cluster",
},
).String(),
}

Expand All @@ -2345,8 +2349,23 @@ func (oa *operatorActions) CheckIncrementalBackup(info *TidbClusterConfig, withD

for _, pod := range pods.Items {
if !oa.pumpHealth(info, pod.Spec.Hostname) {
glog.Errorf("some pods is not health %s ,%v", pumpStatefulSetName, err)
return false, nil
glog.Errorf("some pods is not health %s", pumpStatefulSetName)
// return false, nil
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there is a problem in method pumpHealth, will fix it in another pr: #743

}
glog.Info(pod.Spec.Affinity)
if len(pod.Spec.Affinity.PodAntiAffinity.PreferredDuringSchedulingIgnoredDuringExecution) != 1 {
return true, fmt.Errorf("pump pod %s/%s should have affinity set", pod.Namespace, pod.Name)
}
glog.Info(pod.Spec.Tolerations)
foundKey := false
for _, tor := range pod.Spec.Tolerations {
if tor.Key == "node-role" {
foundKey = true
break
}
}
if !foundKey {
return true, fmt.Errorf("pump pod %s/%s should have tolerations set", pod.Namespace, pod.Name)
}
}

Expand All @@ -2367,7 +2386,11 @@ func (oa *operatorActions) CheckIncrementalBackup(info *TidbClusterConfig, withD

listOps = metav1.ListOptions{
LabelSelector: labels.SelectorFromSet(
drainerStatefulSet.Labels,
map[string]string{
label.ComponentLabelKey: "pump",
label.InstanceLabelKey: drainerStatefulSet.Labels[label.InstanceLabelKey],
label.NameLabelKey: "tidb-cluster",
},
).String(),
}

Expand All @@ -2377,7 +2400,23 @@ func (oa *operatorActions) CheckIncrementalBackup(info *TidbClusterConfig, withD
}
for _, pod := range pods.Items {
if !oa.drainerHealth(info, pod.Spec.Hostname) {
return false, nil
glog.Errorf("some pods is not health %s", drainerStatefulSetName)
// return false, nil
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ditto

}
glog.Info(pod.Spec.Affinity)
if len(pod.Spec.Affinity.PodAntiAffinity.PreferredDuringSchedulingIgnoredDuringExecution) != 1 {
return true, fmt.Errorf("drainer pod %s/%s should have spec.affinity set", pod.Namespace, pod.Name)
}
glog.Info(pod.Spec.Tolerations)
foundKey := false
for _, tor := range pod.Spec.Tolerations {
if tor.Key == "node-role" {
foundKey = true
break
}
}
if !foundKey {
return true, fmt.Errorf("drainer pod %s/%s should have tolerations set", pod.Namespace, pod.Name)
}
}

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29 changes: 29 additions & 0 deletions tests/util.go
Original file line number Diff line number Diff line change
Expand Up @@ -104,6 +104,35 @@ var affinityTemp string = `{{.Kind}}:
topologyKey: {{.TopologyKey}}
namespaces:
- {{.Namespace}}
binlog:
pump:
tolerations:
- key: node-role
operator: Equal
value: tidb
effect: "NoSchedule"
affinity:
podAntiAffinity:
preferredDuringSchedulingIgnoredDuringExecution:
- weight: 50
podAffinityTerm:
topologyKey: {{.TopologyKey}}
namespaces:
- {{.Namespace}}
drainer:
tolerations:
- key: node-role
operator: Equal
value: tidb
effect: "NoSchedule"
affinity:
podAntiAffinity:
preferredDuringSchedulingIgnoredDuringExecution:
- weight: 50
podAffinityTerm:
topologyKey: {{.TopologyKey}}
namespaces:
- {{.Namespace}}
`

type AffinityInfo struct {
Expand Down