sleap-io v0.1.8

What's Changed

• Fix docs by @talmo in #108
• Support NumPy > 2.0 and Python 3.12 by @lochhh in #115

New Contributors

• @lochhh made their first contribution in #115

Full Changelog: v0.1.7...v0.1.8

sleap-io v0.1.7

What's Changed

• Path sanitization hotfix by @talmo in #107

Full Changelog: v0.1.6...v0.1.7

sleap-io v0.1.6

What's Changed

• Grayscale property passthrough by @talmo in #99

Full Changelog: v0.1.5...v0.1.6

sleap-io v0.1.5

What's Changed

• Labels.split and Labels.make_training_splits by @talmo in #98

Full Changelog: v0.1.4...v0.1.5

sleap-io v0.1.4

What's Changed

• Add support for embedding images in .pkg.slp by @talmo in #91
  • Saving SLP files with embedded images will re-save the embedded images.
  • Embed images into SLP files with:
    • labels.save("labels.pkg.slp", embed="user") to embed frames with user-labeled instances (Instance)
    • labels.save("labels.pkg.slp", embed="user+suggestion") to embed frames with user-labeled instances and suggestion frames (useful for inference after training)
    • labels.save("labels.pkg.slp", embed="source") to restore the source video ("unembed")
• Better reprs and QOL by @talmo in #96
  • Better __repr__s for Skeleton, LabeledFrame, Labels, Instance, PredictedInstance
  • Labels.append() and Labels.extend() to add LabeledFrames now will update Labels.tracks, Labels.skeletons and Labels.videos with contents.
  • Labels.update() to manually update Labels.tracks, Labels.skeletons and Labels.videos with contents of Labels.labeled_frames and Labels.suggestions.
  • Labels.replace_filenames(): multiple methods for replacing all video filenames across the project (#85).
  • Skeleton.edge_names to return list of edges as tuples of string names
  • Added docstrings to sio.load_video and related high level Video APIs to clarify supported file formats.
  • Syntactic sugar: try to initialize video backend with Video(filename) construction (#94)

Note: This is a re-release of v0.1.3 which had a borked deployment.

Full Changelog: v0.1.2...v0.1.4

sleap-io v0.1.3

What's Changed

• Add support for embedding images in .pkg.slp by @talmo in #91
  • Saving SLP files with embedded images will re-save the embedded images.
  • Embed images into SLP files with:
    • labels.save("labels.pkg.slp", embed="user") to embed frames with user-labeled instances (Instance)
    • labels.save("labels.pkg.slp", embed="user+suggestion") to embed frames with user-labeled instances and suggestion frames (useful for inference after training)
    • labels.save("labels.pkg.slp", embed="source") to restore the source video ("unembed")
• Better reprs and QOL by @talmo in #96
  • Better __repr__s for Skeleton, LabeledFrame, Labels, Instance, PredictedInstance
  • Labels.append() and Labels.extend() to add LabeledFrames now will update Labels.tracks, Labels.skeletons and Labels.videos with contents.
  • Labels.update() to manually update Labels.tracks, Labels.skeletons and Labels.videos with contents of Labels.labeled_frames and Labels.suggestions.
  • Labels.replace_filenames(): multiple methods for replacing all video filenames across the project (#85).
  • Skeleton.edge_names to return list of edges as tuples of string names
  • Added docstrings to sio.load_video and related high level Video APIs to clarify supported file formats.
  • Syntactic sugar: try to initialize video backend with Video(filename) construction (#94)

Full Changelog: v0.1.2...v0.1.3

sleap-io v0.1.2

What's Changed

• Fix suggestions deserialization by @talmo in #95

Full Changelog: v0.1.1...v0.1.2

sleap-io v0.1.1

What's Changed

• Create docs pages by @talmo in #87
• Add ImageVideo backend by @talmo in #88
• Add SuggestionFrame by @talmo in #89
• Implement ImageVideo support in SLP by @talmo in #90
• Bump to v0.1.1 by @talmo in #93

Full Changelog: v0.1.0...v0.1.1

sleap-io v0.1.0

What's Changed

• Add skeleton utilities by @talmo in #76

  • Skeleton.add_node: Add a node by name or object.
  • Skeleton.add_edge: Add an edge by lists of names or objects.
  • Skeleton.add_symmetry: Add a symmetry edge by lists of names or objects.

• Update CI and versions by @talmo in #77

  • Update dependency ranges (see below)
  • Update action workflow versions
  • Enable M1 mac runners
  • Expand python version range to 3.7-3.12
    • Note: Python 3.7 is no longer tested in CI due to lack of conda-forge compatability.
  • Enable pure conda-forge dependency setup

• Bump to v0.1.0 by @talmo in #78

• Fix multi-skeleton loading by @talmo in #79

  • Fixes #71.

• Add high level APIs by @talmo in #80

  • Add load_video and load_file high level APIs (#48)

• Labels QOL enhancements by @talmo in #81

  • LabeledFrame.remove_predictions: Remove predicted instances from a labeled frame.
  • LabeledFrame.remove_empty_instances: Remove instances with no visible points from a labeled frame.
  • Labels.save: Instance-level convenience wrapper for sio.save_file.
  • Labels.clean: Remove unused or empty frames, instances, videos, skeletons and tracks.
  • Labels.remove_predictions: Remove predicted instances from all labeled frames (#69).
  • Labels.__getitem__: Now supports lists, slices, numpy arrays, tuples of (Video, frame_idx) and Video.

• Video QOL enhancements by @talmo in #82

  • Video.is_open: Checks if the video exists and the backend is set.
  • Video.open: Opens or restarts the backend for reading.
  • Video.close: Closes the backend for reading.
  • Video.exists: Check if the filename for the video exists.
  • Video.replace_filename: Replace the filename and restart the backend.

Notes on dependency pins

• ffmpeg < 6.1 due to imageio/imageio-ffmpeg#99
• h5py >= 3.8.0 due to h5py/h5py#2118
• python >= 3.8 due to h5py >= 3.8.0 (we still support python==3.7 via pip but this is not longer in CI)

Full Changelog: v0.0.14...v0.1.0

sleap-io v0.0.14

What's Changed

• Fix importing in Python 3.7 by @talmo in #75

Full Changelog: v0.0.13...v0.0.14