1.15.1

What's Changed

• Updating cwltool dependencies by @david4096 in #291

Full Changelog: 1.15.0...1.15.1

1.15.0

See https://github.com/dockstore/dockstore/releases/tag/1.15.0 for a human-readable summary

What's Changed

• Ensuring that Dockstore Yaml Validate Rejects .dockstore.yml files that are missing or have an empty primaryDescriptorPath by @fhembroff in #235
• dropwizard 4 update by @denis-yuen in #238
• replace expired docker image by @denis-yuen in #240
• rename reports to avoid clash by @denis-yuen in #242
• add github actions for release by @denis-yuen in #241
• Remove wes checks that are never executed by @kathy-t in #245
• add auto deploy for testing by @denis-yuen in #246
• fix cron build by @denis-yuen in #247
• Remove swagger client in favour of openapi client by @denis-yuen in #249
• Check license file via GitHub action by @coverbeck in #250
• new broad artifactory location by @denis-yuen in #251
• DOCK-2323: Log source and destination paths for file provisioning by @hyunnaye in #252
• bom update by @denis-yuen in #254
• fix cron build by @denis-yuen in #253
• Re-enable failing CLI Test by @coverbeck in #256
• add broad mirror by @denis-yuen in #258
• update dockstore version by @denis-yuen in #260
• Bump actions/checkout from 3 to 4 by @dependabot in #257
• DOCK-2262: invalidates relative path yml files by @hyunnaye in #255
• update to latest 1.15 alpha by @denis-yuen in #261
• need this for failing cron with current develop by @denis-yuen in #263
• Bump actions/setup-java from 3 to 4 by @dependabot in #267
• finish deprecation of author in favour of authors array by @denis-yuen in #269
• cwlavro update (#271) by @denis-yuen in #273
• test core update by @denis-yuen in #275

Full Changelog: 1.14.0...1.15.0

1.15.0-beta.0

testing out release process

1.14.0

What's Changed

• Update PR template for docs by @denis-yuen in #187
• Add review instructions by @coverbeck in #199
• Use new cromwell version by @kathy-t in #201
• clear out a few dependencies by @denis-yuen in #205
• reduce pin by @denis-yuen in #206
• assign reviewers for dependabot by @denis-yuen in #207
• SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
• switch to github lgtm by @denis-yuen in #208
• SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
• Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
• java 17 and compile issue with trs api by @denis-yuen in #211
• Update template with security section by @coverbeck in #212
• rotate bundle by @denis-yuen in #213
• Deleted the zip file once it is unzipped. by @fhembroff in #216
• Added a ToilCompatibleTest class to CLI by @fhembroff in #215
• DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
• webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
• Feature/junit5 by @denis-yuen in #214
• update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
• Display server-url by @KimberleyChong in #220
• Feature/bom update - test optimization by @denis-yuen in #223
• Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
• Made error messages in CLI more user friendly by @fhembroff in #222
• Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
• SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
• Fix Incorrect WDL validation by @fhembroff in #225
• CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
• Corrected Typos found in CLI by @fhembroff in #227
• bom update by @denis-yuen in #228
• Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
• update docker compose by @denis-yuen in #230
• Moved CWL and WDL to constants by @fhembroff in #232
• Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
• Feature/dock 2353/hello world workflow fails by @fhembroff in #236
• DOCK-2349: added error handling message for CWL JSON conversion by @hyunnaye in #237

New Contributors

• @hyunnaye made their first contribution in #204
• @KimberleyChong made their first contribution in #220

Full Changelog: 1.13.1...1.14.0

1.14.0-rc.0

What's Changed

• Update PR template for docs by @denis-yuen in #187
• Add review instructions by @coverbeck in #199
• Use new cromwell version by @kathy-t in #201
• clear out a few dependencies by @denis-yuen in #205
• reduce pin by @denis-yuen in #206
• assign reviewers for dependabot by @denis-yuen in #207
• SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
• switch to github lgtm by @denis-yuen in #208
• SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
• Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
• java 17 and compile issue with trs api by @denis-yuen in #211
• Update template with security section by @coverbeck in #212
• rotate bundle by @denis-yuen in #213
• Deleted the zip file once it is unzipped. by @fhembroff in #216
• Added a ToilCompatibleTest class to CLI by @fhembroff in #215
• DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
• webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
• Feature/junit5 by @denis-yuen in #214
• update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
• Display server-url by @KimberleyChong in #220
• Feature/bom update - test optimization by @denis-yuen in #223
• Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
• Made error messages in CLI more user friendly by @fhembroff in #222
• Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
• SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
• Fix Incorrect WDL validation by @fhembroff in #225
• CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
• Corrected Typos found in CLI by @fhembroff in #227
• bom update by @denis-yuen in #228
• Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
• update docker compose by @denis-yuen in #230
• Moved CWL and WDL to constants by @fhembroff in #232
• Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
• Feature/dock 2353/hello world workflow fails by @fhembroff in #236
• DOCK-2349: added error handling message for CWL JSON conversion by @hyunnaye in #237

New Contributors

• @hyunnaye made their first contribution in #204
• @KimberleyChong made their first contribution in #220

Full Changelog: 1.13.1...1.14.0-rc.0

1.14.0-beta.0

What's Changed

• Update PR template for docs by @denis-yuen in #187
• Add review instructions by @coverbeck in #199
• Use new cromwell version by @kathy-t in #201
• clear out a few dependencies by @denis-yuen in #205
• reduce pin by @denis-yuen in #206
• assign reviewers for dependabot by @denis-yuen in #207
• SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
• switch to github lgtm by @denis-yuen in #208
• SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
• Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
• java 17 and compile issue with trs api by @denis-yuen in #211
• Update template with security section by @coverbeck in #212
• rotate bundle by @denis-yuen in #213
• Deleted the zip file once it is unzipped. by @fhembroff in #216
• Added a ToilCompatibleTest class to CLI by @fhembroff in #215
• DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
• webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
• Feature/junit5 by @denis-yuen in #214
• update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
• Display server-url by @KimberleyChong in #220
• Feature/bom update - test optimization by @denis-yuen in #223
• Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
• Made error messages in CLI more user friendly by @fhembroff in #222
• Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
• SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
• Fix Incorrect WDL validation by @fhembroff in #225
• CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
• Corrected Typos found in CLI by @fhembroff in #227
• bom update by @denis-yuen in #228
• Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
• update docker compose by @denis-yuen in #230
• Moved CWL and WDL to constants by @fhembroff in #232
• Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233

New Contributors

• @hyunnaye made their first contribution in #204
• @KimberleyChong made their first contribution in #220

Full Changelog: 1.13.1...1.14.0-beta.0

1.13.1

Fixes dockstore/dockstore#5183

1.13.0

What's Changed

• bump cromwell version and exclude new jackson core by @wshands in #129
• Feature/fix develop build by @Richard-Hansen in #132
• Feature/hmmm upgrades by @denis-yuen in #135
• Bump slackapi/slack-github-action from 1.16.0 to 1.18.0 by @dependabot in #139
• Bump actions/setup-java from 2 to 3.1.1 by @dependabot in #140
• Bump actions/checkout from 2 to 3 by @dependabot in #137
• Bump actions/cache from 1 to 3 by @dependabot in #136
• see if this makes snyk happier by @denis-yuen in #143
• Add sonarcloud scanning and bump POM versions by @david4096 in #144
• trigger lgtm by @denis-yuen in #145
• Add security policy by @david4096 in #149
• Feature/2083/cli info call by @Richard-Hansen in #148
• Bump actions/setup-java from 3.1.1 to 3.2.0 by @dependabot in #147
• reissue gitlab tokens by @denis-yuen in #153
• Remove residual mentions of --tsv by @amarjandu in #152
• Make test parameter files optional (#4763) by @amarjandu in #155
• Use BOM versions of jackson core etc. by @wshands in #165
• official mvnw by @denis-yuen in #163
• Bump actions/setup-java from 3.2.0 to 3.4.1 by @dependabot in #169
• update bom and generated files by @denis-yuen in #170
• Remove stale configuration instructions by @amarjandu in #154
• Feature/grab bag by @denis-yuen in #173
• Feature/dock 2129/yaml file check by @fhembroff in #161
• Bump slackapi/slack-github-action from 1.18.0 to 1.19.0 by @dependabot in #151
• Removed Liquibase Changeset Message from Output in CircleCI by @fhembroff in #174
• Restore ignored tests by @kathy-t in #176
• Corrected missing space in error message by @fhembroff in #179
• Feature/seab 4525/bitbucket split by @fhembroff in #171
• Parallelism for CLI by @fhembroff in #181
• Update, alphabetize AbstractEntryClient prints by @aofarrel in #180
• update to new token format by @denis-yuen in #182

New Contributors

• @amarjandu made their first contribution in #152
• @fhembroff made their first contribution in #161
• @kathy-t made their first contribution in #176
• @aofarrel made their first contribution in #180

Full Changelog: 1.12.0...1.13.0

1.13.0-rc.0

testing out release process

1.12.0

[maven-release-plugin] copy for tag 1.12.0