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Update develop-ref after #2543 #2544

Merged
merged 804 commits into from
May 15, 2023
Merged

Update develop-ref after #2543 #2544

merged 804 commits into from
May 15, 2023
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Commits on Dec 12, 2022

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Commits on Dec 13, 2022

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  3. Double stars

    JohnHalleyGotway committed Dec 13, 2022
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Commits on Dec 21, 2022

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Commits on Dec 23, 2022

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  2. Revert "print python executable used to run when running without MET_…

    …PYTHON_EXE"
    
    This reverts commit 9e8b8e2.
    georgemccabe committed Dec 23, 2022
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Commits on Dec 28, 2022

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Commits on Jan 9, 2023

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  2. #2370 AOD 550 is interpolated only AOD 440 and 650 are not negative v…

    …alues
    Howard Soh committed Jan 9, 2023
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Commits on Jan 10, 2023

  1. Merge pull request #2398 from dtcenter/bugfix_2370_aeronetv3

    Bugfix 2370 aeronetv3
    hsoh-u authored Jan 10, 2023
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  2. #2387 Convert integer to string for log message

    Howard Soh committed Jan 10, 2023
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  4. #2387 Corrected a log message

    Howard Soh committed Jan 10, 2023
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  5. #2387 Changed to_string to str_format

    Howard Soh committed Jan 10, 2023
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Commits on Jan 12, 2023

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Commits on Jan 13, 2023

  1. Merge pull request #2400 from dtcenter/bugfix_2387_pb2nc_obs_count

    Bugfix 2387 pb2nc obs count
    hsoh-u authored Jan 13, 2023
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  3. Feature #2388 Fix Python environment issue (#2407)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Jan 13, 2023
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Commits on Jan 15, 2023

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Commits on Jan 17, 2023

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  2. Updates to sonarqube setup on seneca.

    MET Tools Test Account committed Jan 17, 2023
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  3. Merge branch 'develop' of https://github.com/dtcenter/MET into develop

    MET Tools Test Account committed Jan 17, 2023
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Commits on Jan 18, 2023

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Commits on Jan 20, 2023

  1. #2228 Added parameters for ellipsoidal earth

    Howard Soh committed Jan 20, 2023
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  3. #2228 Support polar stereographics without scale_factor and ellipsoid…

    …al earth
    Howard Soh committed Jan 20, 2023
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Commits on Jan 21, 2023

  1. #2218 Addedmrtwo unit tests for polar stereographics

    Howard Soh committed Jan 21, 2023
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Commits on Jan 23, 2023

  1. #2218 convert index to meter at xy_to_latlon

    Howard Soh committed Jan 23, 2023
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  2. #2218 Check eccentricity

    Howard Soh committed Jan 23, 2023
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  3. #2218 Changed the order of members

    Howard Soh committed Jan 23, 2023
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  4. #2218 Initialize newly added members

    Howard Soh committed Jan 23, 2023
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Commits on Jan 25, 2023

  1. Feature #2415 develop modulefiles (#2417)

    * Updated module and config files
    
    * Reverting to what was in develop
    jprestop authored Jan 25, 2023
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Commits on Jan 26, 2023

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Commits on Jan 27, 2023

  1. #2218 Added dy_km

    Howard Soh committed Jan 27, 2023
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  2. #2218 Used dy_km

    Howard Soh committed Jan 27, 2023
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Commits on Jan 31, 2023

  1. #2218 Check and adjust semi_major_axis in meters

    Howard Soh committed Jan 31, 2023
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  2. #2218 PAss negative lon to st_latlon_to_xy_func

    Howard Soh committed Jan 31, 2023
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  3. #2218 Removed a warning for ellipsoidal earth

    Howard Soh committed Jan 31, 2023
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Commits on Feb 2, 2023

  1. Merge pull request #2418 from dtcenter/feature_2218_polar_stereographic

    Feature #2218 develop polar stereographic
    hsoh-u authored Feb 2, 2023
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  5. Merge pull request #2434 from dtcenter/feature_2218_polar_stereographic

    #2218 Initialize polar stereographics parameters for ellipsoidal earth
    hsoh-u authored Feb 2, 2023
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Commits on Feb 15, 2023

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Commits on Feb 16, 2023

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  2. Hotfix for develop, for #2437, forgot one reference to the search_par…

    …ent for a dictionary lookup.
    JohnHalleyGotway committed Feb 16, 2023
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  3. Doc-only update the develop branch clarifying the description of the …

    …interp dictionary. The parse_conf_interp() function supports the method and width entries being defined as arrays. It automatically processes all possible permutations of their values.
    JohnHalleyGotway committed Feb 16, 2023
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  4. Feature #2421 update base image (#2440)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Feb 16, 2023
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Commits on Feb 21, 2023

  1. Update .readthedocs.yaml

    Remove pdf from builds and update to Python 3.8
    jprestop authored Feb 21, 2023
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  2. Update .readthedocs.yaml

    Resetting to old values for now.
    jprestop authored Feb 21, 2023
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  3. Update .readthedocs.yaml

    Update to Python 38 and turn off pdf option
    jprestop authored Feb 21, 2023
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Commits on Feb 22, 2023

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  2. Modifying files for installation on WCOS with python3.10, including a…

    … generic change to the compilation script (#2458)
    jprestop authored Feb 22, 2023
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  3. #2428 Initial release

    Howard Soh committed Feb 22, 2023
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  5. #2428 Added met_point_obs_nc.py

    Howard Soh committed Feb 22, 2023
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  6. #2428 Added python_point2grid_pb2nc_TMP_user_python

    Howard Soh committed Feb 22, 2023
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  7. #2428 Changed log message

    Howard Soh committed Feb 22, 2023
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  8. #2428 Moved GP, tmp_nc_base_name, and tmp_nc_file_var_name to python3…

    …_util.cc & python3_util.h
    Howard Soh committed Feb 22, 2023
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  9. #2428 Moved nc_tools to met_point_obs_nc.py

    Howard Soh committed Feb 22, 2023
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  10. #2428 Moved nc_point_obs to met_point_obs_nc.py

    Howard Soh committed Feb 22, 2023
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  11. #2428 Added tmp_nc_point_obs

    Howard Soh committed Feb 22, 2023
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  12. #2428 Do not check if MET_PYTHON_EXE is the same as the MET_PYTHON_BI…

    …N_EXE
    Howard Soh committed Feb 22, 2023
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Commits on Feb 23, 2023

  1. #2428 Do not add MET_BASE/python path

    Howard Soh committed Feb 23, 2023
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  2. Feature 2429 tc pairs members (#2451)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    Co-authored-by: Seth Linden <linden@seneca.rap.ucar.edu>
    3 people authored Feb 23, 2023
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  3. #2428 Set use_var_id at put_data()

    Howard Soh committed Feb 23, 2023
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  4. #2428 Set use_var_id from the global attribute

    Howard Soh committed Feb 23, 2023
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Commits on Feb 24, 2023

  1. Fixed typo.

    DanielAdriaansen committed Feb 24, 2023
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  3. Merge pull request #2462 from dtcenter/bugfix_2428_python_from_env_2

    Bugfix 2428 python embedding with MET_PYTHON_EXE defined
    hsoh-u authored Feb 24, 2023
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  4. Feature 2146 dropdown menus (#2459)

    * testing dropdown menu to see if it works.
    
    * adding sphinx_design to config.py and requirements.txt so that dropdown menus will work.
    
    * testing dropdown menus and fixing to rst formatting
    
    * adding non-child dropdown menus
    
    * First try at child dropdown menus
    
    * Second try at child dropdown menus
    
    * Third try at child dropdown menus
    
    * child dropdown menus
    lisagoodrich authored Feb 24, 2023
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Commits on Feb 27, 2023

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  4. Create LICENSE.md

    JohnHalleyGotway authored Feb 27, 2023
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Commits on Feb 28, 2023

  1. Per METplus Discussion dtcenter/METplus#2063 from @RogerHar, the igno…

    …rance score equation in Appendix C is slightly incorrect. Updating to make it consistent with equation 8 in Gneiting et al 2005.
    JohnHalleyGotway committed Feb 28, 2023
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  2. Bugfix #2426 develop buoy (#2475)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    davidalbo and JohnHalleyGotway authored Feb 28, 2023
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  4. Added MET_PYTHON_LIB variable to account for lib64 vs lib directory; …

    …Updated associated WCOSS2 config files
    jprestop committed Feb 28, 2023
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Commits on Mar 1, 2023

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Commits on Mar 2, 2023

  1. Update docs directly in develop to:

    1. Fix typo: MET-11.0.1 upgrade instructions should be MET-11.1.0.
    2. Add note to update instructions about setting MET_PYTHON_BIN_EXE.
    3. Use code-block formatting in config_options.rst to get rid of unexpected indent warning when building the docs.
    JohnHalleyGotway committed Mar 2, 2023
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Commits on Mar 3, 2023

  1. Update install_met_env.generic

    MET_PYTHON should be the location containing the bin, include, lib and share directories for Python; Removing "/bin" from MET_PYTHON value
    jprestop authored Mar 3, 2023
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Commits on Mar 6, 2023

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  2. #2482 Check if the string value is a datestring first. Then check if …

    …it's a number
    Howard Soh committed Mar 6, 2023
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Commits on Mar 7, 2023

  1. Removing "met/" from "met/docs"

    The structural changes in the last official release removed the met subdirectory.
    jprestop authored Mar 7, 2023
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Commits on Mar 8, 2023

  1. Update documentation.yml

    Added python -m pip install -r docs/requirements.txt
    jprestop authored Mar 8, 2023
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Commits on Mar 9, 2023

  1. Merge pull request #2483 from dtcenter/bugfix_2482_timeslicing_yyyymmdd

    Bugfix #2482 develop time slicing yyyymmdd
    hsoh-u authored Mar 9, 2023
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  2. #2285 Read temporary file as CSV if failas as NetCDF to support point…

    …_data variable
    Howard Soh committed Mar 9, 2023
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  4. #2285 Separeted write_tmp_ascii and make the main code not to be exec…

    …uted by importing
    Howard Soh committed Mar 9, 2023
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Commits on Mar 14, 2023

  1. #22285 Added mask_filters.h and mask_filters.cc

    Howard Soh committed Mar 14, 2023
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Commits on Mar 17, 2023

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  2. Merge pull request #2491 from dtcenter/feature_2401_sonarqube_branch_…

    …setting
    
    Feature #2401 sonarqube_branch_setting
    hsoh-u authored Mar 17, 2023
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Commits on Mar 30, 2023

  1. #2493 updates lat/lon/elv if SiteName is changed

    Howard Soh committed Mar 30, 2023
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  2. Merge pull request #2495 from dtcenter/bugfix_2493_dev_aeronet3_lat_l…

    …on_elv
    
    #2493 updates lat/lon/elv if SiteName is changed
    hsoh-u authored Mar 30, 2023
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Commits on Mar 31, 2023

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Commits on Apr 3, 2023

  1. Feature 2460 dropdown menu appendix a (#2501)

    * testing dropdown menu
    
    * testing dropdown menu take 2
    
    * testing dropdown menu take 3 no header
    
    * testing dropdown menu take 4
    
    * testing dropdown menu take 5
    
    * testing dropdown menu take 6
    
    * File IO section
    
    * File IO section updates
    
    * adding dropdowns BEFORE pcp-combine
    
    * adding dropdowns BEFORE tc-stat
    
    * adding dropdowns BEFORE utilities
    
    * first pass at all dropdowns
    
    * adding some more dropdowns.  Making sure the new spacing is under 79 characters per line.  Exceptions to this include, code blocks, web addresses or headers
    
    * Update docs/Users_Guide/appendixA.rst
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    
    * Update docs/Users_Guide/appendixA.rst
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    
    * Update docs/Users_Guide/appendixA.rst
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    
    * changed all references of BUFRLIB_v10.2.3 to BUFRLIB_v11.3.0.
    
    * Removed the line    Are you using NetCDF version 3.4 or version 4? Currently, only NetCDF version 3.6 can be used with MET.   because that is not true.
    
    * adding troubleshooting dropdowns
    
    * 79 character limit per line
    
    * removing 31.3 & 31.4 dropdown menus
    
    ---------
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    lisagoodrich and jprestop authored Apr 3, 2023
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  4. #2285 Merged from met_point_obs_nc.py

    Howard Soh committed Apr 3, 2023
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  5. #2285 Initial release

    Howard Soh committed Apr 3, 2023
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  6. #2285 Initial release

    Howard Soh committed Apr 3, 2023
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  7. #2285 Moved read_met_point_obs.py Initial release

    Howard Soh committed Apr 3, 2023
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Commits on Apr 4, 2023

  1. #2285 Restructure python scripts

    Howard Soh committed Apr 4, 2023
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Commits on Apr 7, 2023

  1. #2285 Initial release

    Howard Soh committed Apr 7, 2023
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  2. #2285 Initial release

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  3. #2285 Restructure python scripts

    Howard Soh committed Apr 7, 2023
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  4. #2285 Restructure python scripts

    Howard Soh committed Apr 7, 2023
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  5. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  6. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  7. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  8. #2285 Removed xarray and added MaskFilters

    Howard Soh committed Apr 7, 2023
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  9. #2285 Uses MaskFilters

    Howard Soh committed Apr 7, 2023
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  10. #2285 Removed xarry

    Howard Soh committed Apr 7, 2023
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  11. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  12. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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Commits on Apr 10, 2023

  1. #2285 Imnport importlib.util instead of importlib

    Howard Soh committed Apr 10, 2023
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  2. #2285 Change back

    Howard Soh committed Apr 10, 2023
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  3. #2285 Changed importing importlib

    Howard Soh committed Apr 10, 2023
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  4. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 10, 2023
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  5. #2285 Merged scripts/python/met_point_obs_nc.py to scripts/python/met…

    …/point.py
    Howard Soh committed Apr 10, 2023
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  8. Fixes table references and also adds note about assumed path location…

    … and corrects some paths that used MET_BASE.
    DanielAdriaansen committed Apr 11, 2023
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Commits on Apr 13, 2023

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  3. #2285 Changed spaces for indent (4 to 3)

    Howard Soh committed Apr 13, 2023
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  4. #2285 Renamed load_txt to read_2d_text_input. Removed get_grid_metada…

    …ta and added create_header_attrs
    Howard Soh committed Apr 13, 2023
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  5. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 13, 2023
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Commits on Apr 14, 2023

  1. #2474 Avoid the devision by 0

    Howard Soh committed Apr 14, 2023
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  2. #2474 Check if n_alloc is a negative value

    Howard Soh committed Apr 14, 2023
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  3. @2474 Check if E is not allocated before accessing it

    Howard Soh committed Apr 14, 2023
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  5. #2474 Initialize n to 0

    Howard Soh committed Apr 14, 2023
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  10. #2474 renamed create_header_attrs to set_dataplane_attrs

    Howard Soh committed Apr 14, 2023
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  12. #2474 Corrected API name, get_sample_point_obs

    Howard Soh committed Apr 14, 2023
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  13. #2474 Formating (intend)

    Howard Soh committed Apr 14, 2023
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  14. @2474 Updated comments

    Howard Soh committed Apr 14, 2023
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  15. #2474 Removed the convertion option

    Howard Soh committed Apr 14, 2023
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  16. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 14, 2023
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  17. Cleans up code-block formatting and adds captions to relevant code bl…

    …ocks that might be nice to link to since with a caption, the code block has a copyable link to share.
    DanielAdriaansen committed Apr 14, 2023
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  21. Corrects RST error.

    DanielAdriaansen committed Apr 14, 2023
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  22. RST link errors.

    DanielAdriaansen committed Apr 14, 2023
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  23. @2474 Changed long pointer to LongArray

    Howard Soh committed Apr 14, 2023
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  24. #2474 Use LongArray for NetCDF API

    Howard Soh committed Apr 14, 2023
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  25. #2474 Formating (intend), Moved convert_point_data to under met_point…

    …_tools
    Howard Soh committed Apr 14, 2023
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  26. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 14, 2023
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  27. #2474 Formating (intend), Moved convert_point_data to under met_point…

    …_tools
    Howard Soh committed Apr 14, 2023
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  28. #2474 Changed 0 to nullptr

    Howard Soh committed Apr 14, 2023
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Commits on Apr 15, 2023

  1. #2474 Assign FO_Node instead of calling memcpy

    Howard Soh committed Apr 15, 2023
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Commits on Apr 17, 2023

  1. #2285 Check and give wwarning if met_point_data or point_data is miss…

    …ing from python script.
    Howard Soh committed Apr 17, 2023
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  4. Removes examples for MPR/StatAnalysis since it's really just command …

    …line only and no config file is involved.
    DanielAdriaansen committed Apr 17, 2023
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  7. Update docs/Users_Guide/appendixF.rst

    Co-authored-by: jprestop <jpresto@ucar.edu>
    DanielAdriaansen and jprestop authored Apr 17, 2023
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  8. Update docs/Users_Guide/appendixF.rst

    Co-authored-by: jprestop <jpresto@ucar.edu>
    DanielAdriaansen and jprestop authored Apr 17, 2023
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  10. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    DanielAdriaansen committed Apr 17, 2023
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Commits on Apr 18, 2023

  1. Merge pull request #2512 from dtcenter/feature_2474_sonarqube_finding…

    …s_ncutil
    
    Feature 2474 sonarqube findings ncutil
    hsoh-u authored Apr 18, 2023
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  2. Update appendixF.rst

    Fixes typo in Appendix F.
    DanielAdriaansen authored Apr 18, 2023
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Commits on Apr 19, 2023

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  2. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    DanielAdriaansen committed Apr 19, 2023
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  4. #2474 Check the offset

    Howard Soh committed Apr 19, 2023
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Commits on Apr 20, 2023

  1. Merge pull request #2509 from dtcenter/feature_2285_read_point_data

    Feature 2285 read point data
    hsoh-u authored Apr 20, 2023
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  2. #2474 cleanup

    Howard Soh committed Apr 20, 2023
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  3. #2474 Added comment

    Howard Soh committed Apr 20, 2023
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  4. Merge pull request #2515 from dtcenter/feature_2474_sonarqube_finding…

    …s_vector
    
    Feature 2474 sonarqube findings at MTD
    hsoh-u authored Apr 20, 2023
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Commits on Apr 23, 2023

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Commits on Apr 26, 2023

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  2. Revert "#2521 Changed a double pointer to DoubleArray for SonarQube"

    This reverts commit 801e485.
    Howard Soh committed Apr 26, 2023
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  3. #2521 Changed module() to get_module() because module becomes a keywo…

    …rd since C++20
    Howard Soh committed Apr 26, 2023
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  4. #2521 Added data_len argument to get_filtered_nc_data_2d

    Howard Soh committed Apr 26, 2023
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  5. Checks if Nelements is a negative value

    Howard Soh committed Apr 26, 2023
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  6. #2521 Checks the boundary.

    Howard Soh committed Apr 26, 2023
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Commits on Apr 27, 2023

  1. Corrected hdr_cnt from python embedding

    Howard Soh committed Apr 27, 2023
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  2. Rollback

    Howard Soh committed Apr 27, 2023
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  4. #2525 Use -9999. as a missing value

    Howard Soh committed Apr 27, 2023
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  5. #2525 Removed a log message

    Howard Soh committed Apr 27, 2023
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Commits on Apr 28, 2023

  1. Merge pull request #2529 from dtcenter/bugfix_2525_nhdr_1_off

    Bugfix #2525 nhdr 1 off
    hsoh-u authored Apr 28, 2023
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  3. Feature develop cycle change (#2528)

    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * Added paths to ignore
    
    * Added addt'l paths to ignore, specific to METplus
    
    * Added return that I inadvertently removed
    
    * Removed path added to wrong file
    
    ---------
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    lisagoodrich and jprestop authored Apr 28, 2023
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Commits on May 3, 2023

  1. Merge pull request #2526 from dtcenter/feature_2521_sonarqube_finding…

    …s_mtd
    
    Feature 2521 sonarqube findings mtd and madis2nc
    hsoh-u authored May 3, 2023
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Commits on May 4, 2023

  1. Update .readthedocs.yaml

    Modifying the structure of the Python version and updating to Python 3.10 to resolve the Import and Extension errors related to urllib3 in ReadTheDocs builds
    jprestop authored May 4, 2023
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Commits on May 5, 2023

  1. Bugfix 2531 compilation errors (#2533)

    * Resolve error: more than one instance of overloaded function isnan matches the argument list
    
    * Ensure RTD build passes
    
    * Added std:: in front of isnan for compilation on Hera
    
    * Add -std=c++11 to CXXFLAGS
    
    * Added note about C++11
    jprestop authored May 5, 2023
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Commits on May 8, 2023

  1. Update release-notes.rst

    jprestop authored May 8, 2023
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  2. Fix formatting

    jprestop authored May 8, 2023
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  3. Fix formatting problem

    jprestop authored May 8, 2023
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Commits on May 9, 2023

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Commits on May 10, 2023

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  2. Feature #2425 tc_stat_rirw (#2536)

    Co-authored-by: Seth Linden <linden@seneca.rap.ucar.edu>
    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    3 people authored May 10, 2023
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  3. Feature #1060 shapes (#2537)

    Co-authored-by: Daniel Adriaansen <dadriaan@ucar.edu>
    JohnHalleyGotway and DanielAdriaansen authored May 10, 2023
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Commits on May 11, 2023

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  3. Update update_truth.yml

    Name this workflow the same as its named in the dtcenter/METplus repository.
    JohnHalleyGotway authored May 11, 2023
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Commits on May 15, 2023

  1. Per #2542 develop gheidke (#2543)

    * Per #2542, in the ContingencyTable class, update gheidke(), gheidke_ec(), gkuiper(), and gerrity() to return bad data for empty contingency tables rather than erroring out.
    
    * Per #2542, modify TC-Stat config file job number 8 that was added for #2425 by adding the  option. That produces output for both the AHWI and BCLP model names. The BCLP contingency table is empty which triggers this runtime error. Tweaking this newly added tests and confirming that it now runs without error demonstrate the fix.
    JohnHalleyGotway authored May 15, 2023
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